plant surface microbiology.pdf

468
Anton Hartmann et al.
Poindexter JS (1964) Biological properties and classification of the Caulobacter group.
Bacteriol Rev 28:231–295
Pukall R, Brambilla E, Stackebrandt E (1998) Automated fragment length analysis of fluorescently-labeled
16S rDNA after digestion with 4-base cutting restriction enzymes.
J Micobiol Meth 32:55–63
Ramos C, Molbak L, Molin S (2000) Bacterial activity in the rhizosphere analyzed at the
single-cell level by monitoring ribosome contents and synthesis rates. Appl Environ
Microbiol 66:801–809
Ramos C, Licht TR, Sternberg C, Krogfelt KA, Molin S (2001) Monitoring bacterial
growth activity in biofilms from laboratory flow-chambers, plant rhizosphere and
animal intestine. Methods Enzymol 337:21–42
Rheims H, Sproer C, Rainey FA, Stackebrandt E (1996) Molecular biological evidence for
the occurrence of uncultured members of the actinomycete line of descent in different
environments and geographical locations. Microbiology 142:2863–2870
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning. A laboratory manual, 2nd
edn. Cold Spring Harbor Laboratory Press, New York
Schlesner H (1994) Development of media suitable for the microorganisms morphologically
resembling Planctomycetes spp., Pirellula spp., other Planctomycetales from
various aquatic habitats using dilute media. System Appl Microbiol 17:135–145
Schloter M, Borlinghaus R, Bode W, Hartmann A (1993) Direct identification, and localization
of Azospirillum in the rhizosphere of wheat using fluorescence-labelled monoclonal
antibodies and confocal scanning laser microscopy. J Microsc 171:173–176
Schloter M, Assmus B, Hartmann A (1995) The use of immunological methods to detect
and identify bacteria in the environment. Biotechnol Adv 13:75–90
Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int
J Syst Bacteriol 16:313–340
Staley JT (1968) Prosthecomicrobium and Ancalomicrobium: new prosthecate freshwater
bacteria. J Bacteriol 95:1921–1942
Steidle A, Sigl K, Schuhegger R, Ihring A, Schmid M, Gantner S, Stoffels M, Riedel K,
Givskov M, Hartmann A, Langebartels C, Eberl L (2001) Visualization of N-acylhomoserine
lactone-mediated cell-cell communication between bacteria colonizing the
tomato rhizosphere. Appl Environ Microbiol 67:5761–5770
Stoffels M, Castellanos T, Hartmann A (2001) Design and application of new 16S rRNAtargeted
oligonucleotide probes for the Azospirillum-Skermanella-Rhodocista-cluster.
Syst Appl Microbiol 24:83–97
Stotzky G, Broder MW, Doyle JD, Jones RA (1993) Selected methods for the detection and
assessment of ecological effects resulting from the release of genetically engineered
microorganisms to the terrestrial environment. Adv Appl Microbiol 38:1–98
Stubner S, Schloter M, Moeck GS, Coulton JW, Ahne F, Hartmann A (1994) Construction
of umu-fhuA operon fusions to detect genotoxic potential by an antibody-cell surface
reaction. Environ Tox Water Qual 9:285–291
Tan Z, Hurek T, Vinuesa P, Müller P, Ladha JK, Reinhold-Hurek B (2001) Specific detection
of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by
16S-23S ribosomal DNA intergenic spacer-targeted PCR. Appl Environ Microbiol
67:3655–3664
Tas É, Lindström K (2001) Identification of bacteria by their intrinsic sequences: Probe
design and testing of their specificity. In: Akkermans ADL,Van Elsas JD, De Bruijn FJ
(eds) Molecular microbial ecology manual, Suppl. 5, Kluwer Academic Press, Dordrecht
Tolker-Nielsen T, Brinch UC, Ragas PC, Andersen JB, Jacobsen CS, Molin S (2000) Development
and dynamics of Pseudomonas sp. biofilms. J Bacteriol 182:6482–6489