plant surface microbiology.pdf

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616 Subject Index Antifungal activity test 434 Antiport 413 Apoplast 165, 380 Apoplastic space 164 Apoptosis 582 Arabidopsis thaliana 3, 243, 256, 399, Arabinose 173, 602 Arbuscular mycorrhiza 60, 185, 567 Arbuscule 308, 310, 567 Archaea 41 Artemisia annua 243, 247 Arthrobacter globiformis 63, 82, 89 Arum-type mycorrhizas 334 Ascomycetes 76 Asparagine 604 Aspergillus eutrphus 64 A. globiformis 64 A. flavus 240 A. muscaria 203 A. nidulans 580, 590 A. niger 85, 240 A. sydowii 240 A. terreus 580 A. tubingensis 85 Asymbiotic phase 579 Atkinsonella hypoxylon 160, 164, 166 ATP 575 dATP 582 32p-dATP 585, 588 Aureofungin 88 Autofluorescent proteins 8, 18, 431, 438 Automated sequencer 579 Autotrophic organisms 65 Auxin 4, 88, 315 Auxin-type phytohormones 355 Axenically 237 Azadirachta indica 243, 247 Azoarcus 83 Azorhizobium 82, 531 Azospirillum 73, 83, 200, 239, 355, 360 A. brasilense 89, 455 Azotobacter 73, 82, 83, 198 A. choroococcum 84 B Bacillus 2, 63, 73, 83, 198 B. cereus 127, 128 B. geophilum 203 B. megaterium 127 B. subtilis 3,127, 239 B. thuringiensis 4, 121, 535, 540 B. thuringiensis subsp. Galleriae 127 B. thuringiensis var kurstaki 126 Bacteria fungi interaction 197 Bacopa monniera 243, 247,248 Bacterial extraction method 457, 460 Bacterial morphotype 531, 532 Balansia sp. 158 Basidiomycetes 76, 260, 267 Basidiomycota 595 Beauvaria sp. 597 Beijerinckia sp. 73, 83 b-galactosidase 19, 576 b-1,3-glucanase 82 b-glucosidase 87 b-glucuronidase 19 b-importin 590 Bi Dye cycle sequencing kit 579 Biocontrol 432 Biodegradation 74 Biofertilizer 613 Biofilm 154 Biogeochemical 74 Biogeochemical cycles 51, 64 Biogeography 541-542 Bioindicators 54 Bio-insecticide protein 4 Bio-insecticides 121, 122 Biological control agents 361 Biological hardening 613 Biomass production 245 Bioprotector 613 Bioregulator 613 Bioremediation 206 Biosurfactant 153 Biotic factors 26 Biotic signals 2 Biotin 106 Biotrophic 159 Biotrophs 157 BiP protein 590 BLAST 579 BLAST analysis 581 BLASTX 580, 581 BLASTX alignment tool 579 Blue fluorescent protein (BFP) 441 BM25.8 cells 577 Boletinus cavipes 260 B. edulis 260 B. erythropus 260 Boletus luridus 260 B. piperatus 260 Borrelia burgdorferi 4 B. burgdorferi B31 3
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PLANT SURFACE MICROBIOLOGY
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Professor Dr. Ajit Varma Director A
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VI ology. The basic concepts in pla
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VIII Contents 6.1 Abiotic Factors .
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X Section B Contents 7 The Function
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XII 3 Impact of Genetically Modifie
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XIV 4.9 Arabidopsis thaliana . . .
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XVI Contents 4.1 Diversity of Arbus
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XVIII 6.2 Role and Properties of Gl
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XX Contents 4.1 Isolated Cuticles a
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XXII Contents 6.5 CMEIAS v. 3.0: In
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Contributors Abbott, Lynette K. Sch
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Ghimire, Sita R. Centre for Researc
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Meyer, William Department of Plant
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Tripathi,K.K. Department of Biotech
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2 Ajit Varma et al. technical diffi
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4 Ajit Varma et al. prowazekii with
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6 Ajit Varma et al. parasite on oth
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8 Ajit Varma et al. interaction wit
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10 Ajit Varma et al. mative, quanti
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2 Root Colonisation Following Seed
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Fig. 1. Colonisation tube system (f
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3.4 Seed Inoculation Seeds are plac
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selection using GFP-expressing bact
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plant roots from the sand, these ca
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tant for colonisation, but neither
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6.2 Biotic Factors 2 Root Colonisat
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36 CH 4 Ralf Conrad O 2 CH 4 methan
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38 Ralf Conrad Finally, aquatic pla
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40 Ralf Conrad Fig. 3. Emission of
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42 Ralf Conrad The general coloniza
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44 Ralf Conrad acceptor. However, l
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46 Ralf Conrad Brioukhanov A, Netru
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48 Ralf Conrad King GM, Garey MA (1
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50 Ralf Conrad Yao H, Conrad R (200
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52 Galdino Andrade or the transform
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54 Galdino Andrade and 2-15 % prote
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56 Galdino Andrade organic nitrogen
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58 SO4 Galdino Andrade Assimilatory
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60 Galdino Andrade phosphate compou
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62 Galdino Andrade In our laborator
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64 Galdino Andrade Fig. 9. Bacteria
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66 Galdino Andrade Plants Carbon De
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68 Galdino Andrade organic phosphat
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5 Diversity and Functions of Soil M
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6 Signalling in the Rhizobia-Legume
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acid, ethylene and jasmonates are i
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increases the activity of the bdhA
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which are perhaps intermediates in
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122 Galdino Andrade Some studies ha
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124 Galdino Andrade Nutrient limita
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126 Galdino Andrade significant qua
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128 Galdino Andrade decrease in the
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130 Galdino Andrade References and
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132 Galdino Andrade Smith RA, Couch
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134 Bernard R. Glick and Donna M. P
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146 Lukas Schreiber, Ursula Krimm a
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158 James F. White Jr. et al. endop
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160 James F. White Jr. et al. 4.3 P
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162 James F. White Jr. et al. Fig.
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164 James F. White Jr. et al. leaf
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166 James F. White Jr. et al. cutic
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168 James F. White Jr. et al. 6.3 M
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170 James F. White Jr. et al. Fig.
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172 James F. White Jr. et al. form
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174 James F. White Jr. et al. itive
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176 James F. White Jr. et al. Clay
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178 James F. White Jr. et al. White
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180 Michael Kaldorf et al. poplar,
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182 Table 1: Studies assessing the
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184 Michael Kaldorf et al. 1995). S
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186 Michael Kaldorf et al. chitinas
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188 Michael Kaldorf et al. resistan
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190 Michael Kaldorf et al. the GPD/
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192 Michael Kaldorf et al. Referenc
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194 Michael Kaldorf et al. Hoffmann
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196 Michael Kaldorf et al. van Rhij
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198 Rüdiger Hampp and Andreas Maie
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212 Ingrid Kottke Fig. 1. Ectomycor
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214 Ingrid Kottke nificant structur
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216 d Ingrid Kottke rcc ph rccw ccw
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218 Ingrid Kottke Fig. 6. Scheme il
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220 Ingrid Kottke Picea mariana Mil
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222 Ingrid Kottke suberin digestion
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224 Ingrid Kottke When dissolving t
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226 Ingrid Kottke Oh KI, Melville L
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228 respect to soral morphology,tel
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230 Robert Bauer and Franz Oberwink
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238 Giang Huong Pham et al. The fun
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240 Giang Huong Pham et al. reactio
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242 Giang Huong Pham et al. Fig. 5.
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244 Giang Huong Pham et al. Fig. 6.
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246 Treated roots were colonized by
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248 Giang Huong Pham et al. Fig. 9a
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250 Giang Huong Pham et al. Fig. 11
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252 Giang Huong Pham et al. 4.6 Tim
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260 Giang Huong Pham et al. longed
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264 Giang Huong Pham et al. Referen
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16 Cellular Basidiomycete-Fungus In
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Fig. 1. Hypha of Colacogloea peniop
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4.2 Fusion-Interaction 16 Cellular
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Fig. 12. Transverse section through
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282 Sita R. Ghimire and Kevin D. Hy
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294 Marjatta Raudaskoski, Mika Tark
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19 Functional Diversity of Arbuscul
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352 José-Miguel Barea et al. 1994)
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354 José-Miguel Barea et al. 1992;
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356 José-Miguel Barea et al. 5 Rea
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358 José-Miguel Barea et al. 1992;
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360 José-Miguel Barea et al. AM-de
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362 José-Miguel Barea et al. pound
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364 José-Miguel Barea et al. Berta
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366 José-Miguel Barea et al. Giani
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368 José-Miguel Barea et al. Lynch
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370 José-Miguel Barea et al. Toro
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21 Carbohydrates and Nitrogen: Nutr
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394 A. Javelle et al. 1.2 Nitrogen
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396 A. Javelle et al. genes were re
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398 A. Javelle et al. gest that myc
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400 A. Javelle et al. 3.3 Isolation
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402 A. Javelle et al. lular Gln amo
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404 A. Javelle et al. In Paxillus i
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406 A. Javelle et al. capabilities
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408 A. Javelle et al. as two other
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410 A. Javelle et al. Glu. Glutamin
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412 A. Javelle et al. Table 1. Rela
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414 A. Javelle et al. catalysed by
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416 A. Javelle et al. GLU2 is expre
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418 A. Javelle et al. gen to plants
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420 A. Javelle et al. (Hoshida et a
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422 A. Javelle et al. Bajwa R, Abua
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424 A. Javelle et al. Garnier A, Be
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426 A. Javelle et al. Limami A, Phi
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428 A. Javelle et al. Ritchie RJ, G
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23 Visualisation of Rhizosphere Int
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5 Microscope Analysis of Infection
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cells by hyphae. No penetration str
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24 Microbial Community Analysis in
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titative data about the community c
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3.5 Community Analysis by Fatty Aci
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472 Contactangle Daniel Knoll and L
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474 Daniel Knoll and Lukas Schreibe
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478 A cuticle B Daniel Knoll and Lu
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26 Quantifying the Impact of ACC De
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27 Applications of Quantitative Mic
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28 Analysis of Microbial Population
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- Primers for ITS amplification: FG
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6 ITS-RFLP analysis 28 Analysis of
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7 Statistical analysis 28 Analysis
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Software requirements - Scoring of
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568 Gopi K. Podila and Luisa Lanfra
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572 Kbp 5.1 - 2 - 1.3 - Gopi K. Pod
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574 Kbp 5.1 - 2 - 0.9 - Gopi K. Pod
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Page 1218: 594 Giang Huong Pham et al. Fig. 1.
Page 1222: 596 Giang Huong Pham et al. Table 1
Page 1226: 598 Giang Huong Pham et al. nucleic
Page 1230: 600 Giang Huong Pham et al. days wi
Page 1234: 602 Giang Huong Pham et al. Table 3
Page 1238: 604 Giang Huong Pham et al. The mor
Page 1242: 606 phatase in addition to the cons
Page 1246: 608 H3BO3 1.55 MnSO . 4 H2O 0.85 Zn
Page 1250: 610 CuSO 4 . 5H2 O 0.25 CoCl 2 . H2
Page 1254: 612 Giang Huong Pham et al. wrinkle
Page 1258: Subject Index A AAD 590 Abies (fir)
Page 1264: 618 Subject Index Cryosection 317 C
Page 1268: 620 Subject Index Fusarium sp. 73,
Page 1272: 622 Subject Index Leaf surface colo
Page 1276: 624 Subject Index Penicillium sp. 7
Page 1280: 626 Subject Index Salmon sperm DNA
Page 1284: 628 Subject Index Y Yellow fluoresc
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