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Principles of Plant Genetics and Breeding

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568 INDEX<br />

purity test, 446<br />

pyrimidines, 47<br />

QTL mapping, 251<br />

qualitative variation, 83<br />

definition, 121<br />

polygenes <strong>and</strong> polygenic inheritance,<br />

123<br />

quantitative traits, 122<br />

see also Variation<br />

quality protein maize (QPM), 406–409<br />

quantitative genetics, 121–127<br />

quantitative (polygenic) inheritance,<br />

123<br />

quantitative trait loci (QTLs), 250<br />

quantitative traits, 122, 127<br />

quantitative variation, 84<br />

see also variation<br />

r-line, 346<br />

r<strong>and</strong>om amplified polymorphic DNA<br />

(RAPD), 248<br />

r<strong>and</strong>om mating, 111, 115<br />

r<strong>and</strong>om sampling, 147<br />

r<strong>and</strong>omization, 148, 429<br />

recalcitrant seed, 98<br />

recessive (recessivity), 39<br />

recessive mutation, 201<br />

recognition sequence (site), 232<br />

recombinant, 45<br />

recombinant DNA, 29<br />

recombination frequency, 45<br />

recurrent mass selection, 136<br />

recurrent selection, 136, 310<br />

concept, 314<br />

genetic basis, 315<br />

types, 315<br />

regeneration, 222<br />

registered seed, 436, 441<br />

regulation <strong>of</strong> biotechnology, 270–275<br />

biosafety regulation at international<br />

level, 274<br />

concept <strong>of</strong> substantial equivalence,<br />

272<br />

concept <strong>of</strong> precautionary principle,<br />

273<br />

labeling <strong>of</strong> biotech products, 274<br />

Reid, R., 7<br />

replicated tests, 430<br />

replication, 49, 148, 429<br />

reporter genes, 235<br />

reproduction, 55–74<br />

alternation <strong>of</strong> generation, 56<br />

asexual, 62<br />

mode, 55<br />

sexual, 56<br />

types, 56<br />

types <strong>of</strong> flowers, 58<br />

reproductive isolation barriers, 171–178<br />

overcoming challenges, 173<br />

resistance (disease), 368, 370<br />

breeding strategies, 373<br />

durable resistance, 371<br />

gene pyramiding, 374<br />

genetic resistance, 371<br />

genetics, 372<br />

horizontal resistance, 371, 375<br />

pest resistance, 373<br />

polygenic resistance, 374<br />

vertical resistance, 371<br />

vertifolia effect, 375<br />

response to selection, 130<br />

restriction enzymes (restriction<br />

endonucleases), 232<br />

restriction fragment length<br />

polymorphism (RFLP), 248<br />

reverse mutation, 200<br />

ribosomes, 49<br />

rice breeding, 498–507<br />

risk analysis, 264–269<br />

salinity stress breeding, 398<br />

salt tolerance, 399<br />

sample, 147<br />

sample mean, 149<br />

second division restitution (SDR),<br />

216<br />

secondary gene pool, 89<br />

sectorial mutants, 206<br />

seed certification, 435, 441, 445,<br />

447<br />

seed germination test, 445<br />

seed industry, 436<br />

seed testing, 445<br />

seedlessness (breeding), 414<br />

segmental alloploids, 216, 221<br />

selection, 6, 18, 113<br />

index, 133<br />

intuitive index, 134<br />

modes, 115<br />

for multiple traits, 133<br />

response in breeding, 130–134<br />

selection differential, 131<br />

selection index, 133<br />

selective (preferential) pairing, 219<br />

selfed family selection, 319<br />

self-incompatibility, 68<br />

self-pollinated, 60<br />

semidwarfs, 363<br />

sequence characterized amplified<br />

regions (SCAR), 249<br />

sequence tagged sites (STS), 249<br />

sexual hybridization, 164<br />

shattering resistance, 362<br />

shoot culture, 183<br />

short-day plants, 364<br />

silent mutation, 202<br />

Simmonds, N.W., 23<br />

simple linear regression, 152<br />

simple sequence repeats (SSR), 249<br />

single-cell selection, 193<br />

single cross, 170<br />

single nucleotide polymorphisms (SNP),<br />

249<br />

single-seed descent, 297–303<br />

site-directed mutagenesis, 83<br />

somaclonal variation, 188, 193<br />

see also variation<br />

somatic embryogenesis, 183<br />

somatic hybridization, 185<br />

sorghum breeding, 509–518<br />

southern hybridization, 232<br />

soybean breeding, 519–527<br />

spike, 59<br />

spontaneous mutation, 200<br />

stability analysis, 423–425<br />

stabilizing selection, 115<br />

stamen, 58<br />

st<strong>and</strong>ard deviation, 150<br />

st<strong>and</strong>ard error <strong>of</strong> the mean, 151<br />

statistical hypothesis, 147<br />

statistical significance, 147<br />

statistics, 146–162<br />

analysis <strong>of</strong> variance, 154<br />

chi-square test, 153<br />

coefficient <strong>of</strong> variation, 151<br />

experimental design, 148<br />

hypothesis, 147<br />

measures <strong>of</strong> central tendency, 149<br />

measures <strong>of</strong> dispersion, 150<br />

multivariate statistics, 155–161<br />

normal distribution, 150<br />

population versus sample, 147<br />

probability, 149<br />

simple linear regression, 152<br />

t-test, 153<br />

structural genes, 52<br />

structural mutation, 200<br />

substantial equivalence, 272<br />

supernumerary chromosomes, 229<br />

suspension culture, 182<br />

synteny, 53<br />

synthetic cultivars, 327<br />

synthetic seed, 184<br />

t-test, 153<br />

tagging commercial seed, 446<br />

t<strong>and</strong>em selection, 133

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