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Principles of Plant Genetics and Breeding

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200 CHAPTER 12<br />

genetic alteration (versus the r<strong>and</strong>om genetic alteration<br />

produced by conventional mutagenesis), it appears that<br />

breeders are gravitating towards this truly revolutionary<br />

technology for creating new variability. However, no<br />

approach should be written <strong>of</strong>f as every now <strong>and</strong> then<br />

some breeders find good reason to use a technique or<br />

technology that has been marginalized by advances in<br />

science <strong>and</strong> technology.<br />

In conventional breeding <strong>of</strong> sexual plants, genetic<br />

variability is derived from recombination. Parents must<br />

not be identical, or else there would be no segregation<br />

in the F 2 generation. Even when parents are dissimilar,<br />

they <strong>of</strong>ten have similar “housekeeping genes” that are<br />

common to both parents. Whereas segregation will not<br />

occur for these common genes, mutagenesis can create<br />

variability by altering them.<br />

Types <strong>of</strong> mutation<br />

In terms <strong>of</strong> origin, mutations may be spontaneous<br />

(natural) or induced (artificial, with the aid <strong>of</strong> agents).<br />

Spontaneous mutations arise at the very low rate <strong>of</strong><br />

about 10 −5 or 10 −6 per generation for most loci in most<br />

organisms. This translates to one in 100,000 or one in<br />

1,000,000 gametes that may carry a newly mutated<br />

allele at any locus. They are caused by mistakes in molecular<br />

processes associated with the replication <strong>of</strong> DNA,<br />

recombination, <strong>and</strong> nuclear division. However, because<br />

mutagenic agents are common in the general environment,<br />

induced mutations, as a result <strong>of</strong> these agents<br />

(natural radiations), are hard to distinguish from spontaneously<br />

induced mutations due to cellular processes.<br />

Mutations may also be classified according to the type<br />

<strong>of</strong> structural change produced:<br />

1 Genomic mutation: changes in chromosome number<br />

(gain or loss in complete sets <strong>of</strong> chromosomes or<br />

parts <strong>of</strong> a set).<br />

2 Structural mutation: changes in chromosome structure<br />

(e.g., duplications <strong>of</strong> segments, translocation <strong>of</strong><br />

segments).<br />

3 Gene mutation: changes in the nucleotide constitution<br />

<strong>of</strong> DNA (by deletion or substitution).<br />

Mutation may occur in the nuclear DNA or chromosomes,<br />

or in extranuclear (cytoplasmic) genetic systems.<br />

A good example <strong>of</strong> the practical application <strong>of</strong> mutations<br />

in plant breeding is the cytoplasmic-genetic malesterility<br />

gene, which occurs in chloroplasts.<br />

In terms <strong>of</strong> gene action, a mutation may be recessive<br />

or dominant:<br />

1 Recessive mutation: change <strong>of</strong> a dominant allele to a<br />

recessive allele (A → a).<br />

2 Dominant mutation: change <strong>of</strong> a recessive allele to a<br />

dominant allele (a → A).<br />

Mutations that convert the wild type (the common<br />

phenotype) to the mutant form (the rare phenotype) are<br />

called forward mutations, while those that change<br />

a mutant phenotype to a wild phenotype are called<br />

reverse mutations. Forward mutations are more common<br />

than reverse mutations. Recessive mutations are<br />

the most common types <strong>of</strong> mutations. However, recessive<br />

alleles in a diploid are expressed only when they are<br />

in the homozygous state. Consequently, an organism<br />

may accumulate a genetic load without any consequence<br />

because <strong>of</strong> heterozygous advantage. As previously discussed,<br />

outcrossing species are susceptible to inbreeding<br />

depression (loss <strong>of</strong> vigor), because <strong>of</strong> the opportunities<br />

for expression <strong>of</strong> deleterious recessive alleles.<br />

Induced mutations versus spontaneous mutations<br />

Spontaneous mutations produce novel alleles for the<br />

evolutionary process. Natural mutations have the benefit<br />

<strong>of</strong> being subjected to the evolutionary process whereby<br />

viable mutants become recombined with existing forms<br />

<strong>and</strong> become adapted under the guidance <strong>of</strong> natural<br />

selection. Mutagenesis can be used to create new alleles<br />

that can be incorporated into existing cultivars through<br />

recombination following hybridization <strong>and</strong> under the<br />

guidance <strong>of</strong> artificial selection. Modern crop production<br />

systems are capable <strong>of</strong> providing supplemental care to<br />

enable a mutant that would not have survived natural<br />

selection to become productive. As previously discussed,<br />

a significant number <strong>of</strong> commercial cultivars originated<br />

from mutation breeding techniques. Furthermore, the<br />

rate <strong>of</strong> spontaneous mutation is low (10−6 per locus).<br />

Artificial mutagenesis aims to increase mutation rates for<br />

desired traits.<br />

Cell type: gametic versus somatic mutations<br />

Mutations may originate in the gametic or somatic cells.<br />

Gametic mutations are heritable from one generation<br />

to the next <strong>and</strong> are expressed in the entire plant.<br />

However, mutations in a somatic tissue will affect only<br />

that portion <strong>of</strong> the plant, resulting in a condition called<br />

chimera. In species that produce tillers, it is possible<br />

to have a tiller originate from a chimeric tissue, while<br />

others are normal. A chimera consists <strong>of</strong> two genetically<br />

distinct tissues <strong>and</strong> may produce two distinct flowers on

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