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Principles of Plant Genetics and Breeding

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elow a certain predetermined level, the accession is<br />

regrown to obtain fresh seed.<br />

Field growing<br />

Accessions are regrown to obtain fresh seed or to<br />

increase existing supplies (after filling orders by scientists<br />

<strong>and</strong> other clients). To keep the genetic purity, the<br />

accessions are grown in isolation, each plant covered<br />

with a cotton bag to keep foreign sources <strong>of</strong> pollen out<br />

<strong>and</strong> also to ensure self-pollination.<br />

Cryopreservation<br />

Cryopreservation or freeze-preservation is the storage<br />

<strong>of</strong> materials at extremely low temperatures <strong>of</strong> between<br />

−150 to −196°C in liquid nitrogen. <strong>Plant</strong> cells, tissue, or<br />

other vegetative material may be stored this way for<br />

a long time without loosing regenerative capacity.<br />

Whereas seed may also be stored by this method, cryopreservation<br />

is reserved especially for vegetatively propagated<br />

species that need to be maintained as living plants.<br />

Shoot tip cultures are obtained from the material to<br />

be stored <strong>and</strong> protected by dipping in a cryoprotectant<br />

(e.g., a mixture <strong>of</strong> sugar <strong>and</strong> polyethylene glycol plus<br />

dimethylsulfoxide).<br />

In vitro storage<br />

Germplasm <strong>of</strong> vegetatively propagated crops is normally<br />

stored <strong>and</strong> distributed to users in vegetative forms such<br />

as tubers, corms, rhizomes, <strong>and</strong> cuttings. However, it<br />

is laborious <strong>and</strong> expensive to maintain plants in these<br />

forms. In vitro germplasm storage usually involves tissue<br />

culture. There are several types <strong>of</strong> tissue culture systems<br />

(suspension cells, callus, meristematic tissues). To use<br />

suspension cells <strong>and</strong> callus materials, there must be an<br />

established system <strong>of</strong> regeneration <strong>of</strong> full plants from<br />

these systems, something that is not available for all<br />

plant species yet. Consequently, meristem cultures are<br />

favored for in vitro storage because they are more stable.<br />

The tissue culture material may be stored using the<br />

method <strong>of</strong> slow growth (chemicals are applied to retard<br />

the culture temperature) or cryopreservation.<br />

Molecular conservation<br />

The advent <strong>of</strong> biotechnology has made it possible for<br />

researchers to sequence DNA <strong>of</strong> organisms. These<br />

sequences can be searched (see Bioinformatics in<br />

Chapter 14, p. 238) for genes at the molecular level.<br />

PLANT GENETIC RESOURCES FOR PLANT BREEDING 101<br />

Specific genes can be isolated by cloning <strong>and</strong> used in<br />

developing transgenic products.<br />

Using genetic resources<br />

Perceptions <strong>and</strong> challenges<br />

Breeders, to varying degrees, acknowledge the need to<br />

address the genetic vulnerability <strong>of</strong> their crops. Further,<br />

they acknowledge the presence <strong>of</strong> large amounts <strong>of</strong><br />

genetic variation in wild crop relatives. However, much<br />

<strong>of</strong> this variability is not useful to modern plant breeding.<br />

In using wild germplasm, there is a challenge to sort<br />

out <strong>and</strong> detect those germplasms that are useful to<br />

breeders. Modern cultivars have resulted from years<br />

<strong>of</strong> accumulation <strong>of</strong> favorable alleles that have been<br />

gradually assembled into adapted interacting multilocus<br />

combinations. Introgression <strong>of</strong> unadapted genes may<br />

jeopardize these combinations through segregation <strong>and</strong><br />

recombination. Hence, some breeders are less inclined<br />

to use unadapted germplasm. However, there are occasions<br />

when the breeder has little choice but to take<br />

the risk <strong>of</strong> using unadapted germplasm (e.g., specific<br />

improvement <strong>of</strong> traits such as new races <strong>of</strong> disease, quality<br />

issues), because alleles for addressing these problems<br />

may be non-existent in the adapted materials. <strong>Plant</strong><br />

breeders engaged in the breeding <strong>of</strong> plant species that<br />

have little or no history <strong>of</strong> improvement are among the<br />

major users <strong>of</strong> active collections in germplasm banks.<br />

For such breeders, they may have no alternative but<br />

to evaluate primitive materials to identify those with<br />

promise for use as parents in breeding.<br />

<strong>Plant</strong> breeders may use germplasm collections in one<br />

<strong>of</strong> two basic ways: (i) as sources <strong>of</strong> cultivars; or (ii) as<br />

sources <strong>of</strong> specific genes. A breeding collection contains<br />

alleles for specific traits that breeders can transfer into<br />

adapted genotypes using appropriate breeding methods.<br />

Accessions must be properly documented to facilitate the<br />

search by users. This means, there should be accurate<br />

passport <strong>and</strong> descriptor information for all accessions.<br />

Unfortunately, this is not the case for many accessions.<br />

The redundancy in germplasm banks is viewed by<br />

some breeders as unacceptable. A study showed that <strong>of</strong><br />

the 250,000 accessions <strong>of</strong> barley at that time in repositories,<br />

only about 50,000 were unique. Such discrepancy<br />

leads to false estimation <strong>of</strong> the true extent <strong>of</strong> diversity in<br />

the world collection. A large number <strong>of</strong> the accessions<br />

are also obsolete <strong>and</strong> have little use to modern plant<br />

breeding programs. Germplasm evaluation at the level<br />

<strong>of</strong> germplasm banks is very limited, making it more

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