Principles of Plant Genetics and Breeding

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viii INDUSTRY HIGHLIGHTS BOXES Klein, Robert Klein, Henry Nguyen, Darrell Rosenow, Graeme Hammer, and Bob Henzell Chapter 22 QPM: enhancing protein nutrition in sub-Saharan Africa Twumasi Afriyie Chapter 23 MSTAT: a software program for plant breeders Russell Freed Chapter 24 Public release and registration of “Prolina” soybean Joe W. Burton and Plant variety protection in Canada B. Riché and D. J. Donnelly Chapter 25 Plant breeding research at ICRISAT P. M. Gaur, K. B. Saxena, S. N. Nigam, B. V. S. Reddy, K. N. Rai, C. L. L. Gowda, and H. D. Upadhyaya Chapter 26 An example of participatory plant breeding: barley at ICARDA S. Ceccarelli and S. Grando Chapter 27 Bringing genomics to the wheat fields K. A. Garland-Campbell, J. Dubcovsky, J. A. Anderson, P. S. Baenziger, G. Brown-Guedira, X. Chen, E. Elias, A. Fritz, B. S. Gill, K. S. Gill, S. Haley, K. K. Kidwell, S. F. Kianian, N. Lapitan, H. Ohm, D. Santra, M. Sorrells, M. Soria, E. Souza, and L. Talbert Chapter 28 Hybrid breeding in maize F. J. Betrán Chapter 29 Breeding rice Anna Myers McClung Chapter 30 Sorghum breeding William Rooney Chapter 31 Estimating inheritance factors and developing cultivars for tolerance to charcoal rot in soybean James R. Smith Chapter 32 Peanut (Arachis hypogaea L.) breeding and root-knot nematode resistance Charles Simpson Chapter 33 The breeding of potato John E. Bradshaw Chapter 34 Cotton breeding Don L. Keim
Page 2: Principles of Plant Genetics and Br
Page 6: Principles of Plant Genetics and Br
Page 10: Industry highlights boxes, vii Indu
Page 14: Industry highlights boxes Chapter 1
Page 20: x INDUSTRY HIGHLIGHTS BOX AUTHORS M
Page 24: xii PREFACE problems. The professio
Page 30: Part I Underlying science and metho
Page 34: Purpose and expected outcomes Agric
Page 38: to the expression of certain attrib
Page 42: in poor economies, where they save
Page 46: can now be transferred from virtual
Page 50: George Acquaah HISTORY AND ROLE OF
Page 54: Figure 3 Dr Twumasi Afriyie, CIMMYT
Page 58: Part A Please answer the following
Page 62: Purpose and expected outcomes As in
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crops. Primary crops are those whos
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Figure 1 Thomas Jefferson, third pr
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Roll call of domesticated plants It
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misleading effect of a variable env
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of spread, life cycle, and most sui
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and unconventional. This categoriza
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crop by the producer. Also, some in
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Resource investment Human capital I
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Purpose and expected outcomes Plant
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(discussed next). In addition to th
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First cell division Second cell div
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Egg 1 /2A 1 /2a 1 /4AA 1 /4Aa Polle
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Multiple genes Just as a single gen
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Chiasma A A B B A B A A Bivalents b
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Individual expresses gene of intere
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into proteins. Because genes vary i
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First base U U UUU UUC UUA UUG (exo
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Inducer removes inhibitor Gene a In
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Purpose and expected outcomes Repro
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Zygote influenced by the duration o
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tobacco). However if a flower lacks
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of all gene loci and traits of the
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Apomixis Seed production in higher
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Potential pathways for apomixis gen
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(a) (b) PLANT REPRODUCTIVE SYSTEMS
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Stigma Pin flower Thrum flower Figu
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True male sterility There are three
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Kiesselbach, T.A. 1999. The structu
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Purpose and expected outcomes Biolo
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3 Frequently, the scientist who fir
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Types of variation among plants As
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It should be pointed out that recom
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The Ac element has an open reading
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Short short short plants Short shor
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Purpose and expected outcomes As pr
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crossing involving parents from wit
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PLANT GENETIC RESOURCES FOR PLANT B
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(a) Hybrids with GP3 Anomalous, let
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What plant breeders can do to addre
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into wild habitats by livestock far
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ackup collections, active collectio
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elow a certain predetermined level,
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located in developing countries, wh
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and the Animal and Plant Health Ins
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Astley, D. 1987. Genetic resource c
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Aa, and 51 will be aa. Using the pr
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Disequilibrium 1 0.5 0 0 c = 0.5 Fi
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germplasm collection and maintenanc
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Differential fitness is a factor th
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individual through one parent back
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Purpose and expected outcomes Most
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Polygenes and polygenic inheritance
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of the trait of interest determines
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variation that the primary genetic
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may also be reported as a percentag
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will be advanced, and will conseque
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Frequency Frequency µ µ s Phenoty
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Selection using a restricted index
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INTRODUCTION TO QUANTITATIVE GENETI
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Explicit indices are laborious, req
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This is done for each combination a
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A B C Males (a) Conceptual Paired r
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Falconer, D.S., and T.F.C. Mackay.
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averages, to the more complex multi
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andomization. The blocks should be
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Coefficient of variation The coeffi
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By plugging values for X i , corres
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Multivariate statistics in plant br
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PC3 (15.8%) PC2 (30.72%) 0.10 0.05
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Canonical function II 0.8 0.6 0.4 0
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Discriminant function analysis Disc
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Section 5 Tools in plant breeding C
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Applications of crossing in plant b
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emasculation is not a universal req
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However, in other crosses, the F 2
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Single cross A × B AB Proportion A
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3 Creation of new alloploids. Wide
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SEXUAL HYBRIDIZATION AND WIDE CROSS
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SEXUAL HYBRIDIZATION AND WIDE CROSS
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R. C. Buckner and his colleagues su
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Purpose and expected outcomes The c
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TISSUE CULTURE AND THE BREEDING OF
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previously described. Sometimes, to
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fraction of androgenic grains devel
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Introduction Sergey Chalyk TISSUE C
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only be maintained by vegetative pr
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Sexually reproductive Apomict New c
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Purpose and expected outcomes It wa
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the same plant. However, the dual c
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1 The ends of the segment may be di
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mutagen frequency is desired, the e
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Introduction F. Laurens MUTAGENESIS
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Climatic adaptation MUTAGENESIS IN
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MUTAGENESIS IN PLANT BREEDING 211 K
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Part A Please answer the following
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Triticum monococcum (2n = 2x = 14)
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(a) (b) A B A B a b a b A B A B a b
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Table 13.4 Genetics of autoploids.
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of sterility because of the odd chr
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(a) (b) (c) Figure 1 (a) Germinated
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Figure 2 In vitro regenerated plant
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(AABBDDRR, 2n = 8x = 56), but it re
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(in alloploids) or homologous (in a
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Purpose and expected outcomes Genes
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and expression (including codon usa
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1 Efficient plant regeneration syst
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Structural defect in the gene const
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sequence analysis. It is an applica
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Analysis BIOTECHNOLOGY IN PLANT BRE
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BIOTECHNOLOGY IN PLANT BREEDING 243
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of genes of known functions. Three
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source of the gene is a wild germpl
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ands for identification may minimiz
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location, genetic effects, and the
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3 Germplasm evaluation. Markers can
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Engineering pest resistance To date
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Purpose and expected outcomes Intel
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the key functions of a patent is to
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The development of truly new and un
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Ethics in plant breeding Manipulati
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Introduction ISSUES IN THE APPLICAT
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ISSUES IN THE APPLICATION OF BIOTEC
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Overview of the regulation of the U
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Table 15.2 Some viral-coated protei
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conditions. Further, these phenotyp
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there is no inherent health risk in
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esistance concerns (or “collatera
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Damage to economic interest (market
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Section 6 Classic methods of plant
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Open-pollinated cultivars Contrary
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Common plant breeding notations Pla
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(a) Year 1 Year 2 Year 3 (b) Source
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2 Cultivars developed for a discrim
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especially where readily identifiab
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Comments 1 Growing parents, making
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Comments Generation Year 1 P 1 × P
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3 Natural selection may increase fr
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5 Every plant originates from a dif
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1 year BREEDING SELF-POLLINATED SPE
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BREEDING SELF-POLLINATED SPECIES 30
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Year 1 Year 2 F 1 Year 3 Year 4 Yea
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2 Extensive advanced testing is not
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Applications One of the earliest ap
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species (maize) and has been a majo
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Purpose and expected outcomes As pr
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epistatic interactions enhance the
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Season 1 Source population C 0 Seas
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Procedure: cycle 1 This is the same
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Advantages and disadvantages The ma
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(a) (b) Figure 1 Examples of (a) Po
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Figure 3 Range of seed development
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Applications The scheme has been us
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stems from several biological facto
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Factors affecting the performance o
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7 Give a specific disadvantage of m
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Other notable advances in the breed
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BREEDING HYBRID CULTIVARS 337 ducin
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BREEDING HYBRID CULTIVARS 339 for c
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of interest. As Falconer indicated,
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patterns derived from the same open
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(a) (b) Seed parent (male-sterile)
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Table 18.1 Calculating heat units a
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such as sugarcane (most commercial
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Section 7 Selected breeding objecti
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water utilization, photoperiod, har
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expense of the rest of the plant. N
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usually results from one component
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Figure 3 Field trials demonstrating
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References Concept of yield plateau
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Shatter-sensitive cultivars are sus
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Nature, types, and economic importa
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elative to a benchmark. A genotype
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Types of genetic resistance The com
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General considerations for breeding
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for most middling resistance. It sh
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pathogen to give resistance), was c
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BREEDING FOR RESISTANCE TO DISEASES
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BREEDING FOR RESISTANCE TO DISEASES
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5 The plant or cell overproduces th
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Purpose and expected outcomes Clima
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ultimately its productivity and eco
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Breeding for drought resistance Dro
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drought. Consequently, phenotypic s
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BREEDING FOR RESISTANCE TO ABIOTIC
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More N partitioned to leaves before
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interruption in normal germination,
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Table 21.1 Relative salt tolerance
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toxicities of economic importance t
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Acevedo, E., and E. Fereres. 1993.
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Table 22.1 Essential amino acids th
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BREEDING COMPOSITIONAL TRAITS AND A
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Figure 1 Farmer (left) and research
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the presence of β-carotene, but no
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and cell walls are degraded. There
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milling, extraction of oil, starch
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Section 8 Cultivar release and comm
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in two stages. The first stage, cal
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genotype is reduced. This raises th
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Different models of ANOVA are used
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Table 23.2 Stability analysis. PERF
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PERFORMANCE EVALUATION FOR CROP CUL
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esources available (land, seed, lab
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Advantages 1 It is the simplest of
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Mapping populations have additional
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Purpose and expected outcomes The u
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Funk Columbiana Farm Seed Germain
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Joe W. Burton SEED CERTIFICATION AN
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Registered seed Registered seed is
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Canada’s Plant Breeders’ Rights
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Seed certification process There ar
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Table 24.1 Information on a seed ta
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Boswell, V.R. 1961. The importance
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property is a major one in plant br
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important issues to be considered i
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Soybean Soybean research is conduct
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INTERNATIONAL PLANT BREEDING EFFORT
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Selected accomplishments The impact
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national entities. More importantly
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Cicarelli contest that most farmers
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EMERGING CONCEPTS IN PLANT BREEDING
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EMERGING CONCEPTS IN PLANT BREEDING
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Principles of organic plant breedin
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Part II Breeding selected crops Cha
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Adaptation Wheat is best adapted to
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are less successful, being of poor
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Introduction BREEDING WHEAT 477 Ind
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Host plant resistance to disease an
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Greenhouse nursery Breeders may use
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when the production area is isolate
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Taxonomy Kingdom Plantae Subkingdom
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encloses the soft starch at the cen
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Designated ms 1 , ms 2 ,...ms n , o
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F. J. Betrán Texas A&M University,
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Development of hybrids BREEDING COR
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chambers may be used for experiment
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orer. A chemical found in corn with
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A British sea captain brought rice
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while awnless is conditioned by an
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Figure 1 Rice panicle being prepare
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Figure 5 A foundation seed field of
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emoved with forceps, the cut may be
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green midrib because of the presenc
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BREEDING SORGHUM 513 Kansas State U
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Summer Year 5 Summer Year 7 Summer
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covered with the bag. Pollination s
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and brown being dominant over gray.
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BREEDING SOYBEAN 523 easily selecte
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BREEDING SOYBEAN 525 An advantage o
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Common breeding objectives 1 Grain
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Program objectives Charles Simpson
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BREEDING PEANUT 533 lines in hopes
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for emasculation, which is done in
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Evolution of the modern potato crop
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BREEDING POTATO 541 Table 1 The Sco
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(berries) called potato balls. The
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6 Potato tuber quality improvement.
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grown in America, Africa, Asia, and
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Introduction Don L. Keim BREEDING C
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BREEDING COTTON 551 are grown in tr
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economically important traits has b
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Part B Please answer the following
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Central dogma: The underlying model
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Mitosis: The process of nuclear div
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Chapter 1 http://www.foodfirst.org/
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Imperial unit Metric conversion Vol
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complex inheritance, 42 composite c
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minor gene resistance, 371 minor ge
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technology protection system (TPS),
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