Principles of Plant Genetics and Breeding
Principles of Plant Genetics and Breeding
Principles of Plant Genetics and Breeding
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246 CHAPTER 14<br />
sequence, <strong>and</strong> RIP coding sequence. <strong>Plant</strong> B consists<br />
<strong>of</strong> a promoter that is active during germination <strong>and</strong><br />
a CRE coding sequence. When the seed from a cross<br />
<strong>of</strong> A × B is planted, the floxing reaction occurs.<br />
Because the LEA promoter is inactive after late<br />
embryogenesis, the expression <strong>of</strong> the RIP is restricted<br />
to the seeds <strong>of</strong> the resulting mature plants from the<br />
hybridization.<br />
3 The use <strong>of</strong> an inducible promoter. This strategy is<br />
similar to using the hybridization process. However,<br />
in this case, the germination-specific promoter is<br />
replaced by a promoter that is controlled directly by<br />
an exogenous substance.<br />
Current status <strong>of</strong> GURT<br />
Since the first GURT patent was awarded jointly to<br />
USDA <strong>and</strong> Delta <strong>and</strong> Pine L<strong>and</strong>, various entities,<br />
including universities <strong>and</strong> private corporations, have<br />
pursued the development <strong>of</strong> a variety <strong>of</strong> technologies<br />
for seed sterilization. These include Syngenta (with at<br />
least eight GURT patents), Dupont, Monsanto, BASF,<br />
Iowa State University, <strong>and</strong> Cornell University. The TPS<br />
technology has so far not been commercially exploited.<br />
However, it appears various companies are working<br />
towards this objective. The Convention on Biological<br />
Diversity continues to discuss the issue. Like every technology,<br />
there are those who see the promise <strong>of</strong> TPS <strong>and</strong><br />
those who describe it in the most unflattering terms.<br />
Some <strong>of</strong> the stated potential advantages are:<br />
1 TPS would be an incentive for further research <strong>and</strong><br />
development <strong>of</strong> value-added cultivars.<br />
2 It could possibly reduce the unintended gene flow<br />
from transgenic cultivars to conventional cultivars.<br />
3 It could reduce the incidence <strong>of</strong> volunteer weeds.<br />
Distracters counter that:<br />
1 The only reason for developing <strong>and</strong> deploying the<br />
technology is to maximize the pr<strong>of</strong>its <strong>of</strong> seed<br />
companies.<br />
2 Poor farmers cannot afford the seed; further, they<br />
cannot save seed to plant if they wanted to.<br />
3 The protection provided lasts longer than any other<br />
similar protection system already in place.<br />
Molecular plant breeding<br />
Molecular breeding may be defined as the use <strong>of</strong><br />
molecular markers, in conjunction with linkage maps<br />
<strong>and</strong> genomics, to select plants with desirable traits on<br />
the basis <strong>of</strong> genetic assays. The potential <strong>of</strong> indirect<br />
selection in plant breeding was recognized in the 1920s,<br />
but indirect selection using markers was first proposed<br />
in 1961 by Thoday. The lack <strong>of</strong> suitable markers slowed<br />
the adoption <strong>of</strong> this concept. Molecular breeding<br />
gained new momentum in the 1980s <strong>and</strong> has since<br />
made rapid progress, with the evolution <strong>of</strong> DNA marker<br />
technologies.<br />
Molecular markers are used for several purposes in<br />
plant breeding.<br />
1 Gaining a better underst<strong>and</strong>ing <strong>of</strong> breeding materials<br />
<strong>and</strong> breeding system. The success <strong>of</strong> a breeding<br />
program depends to a large extent on the materials<br />
used to initiate it. Molecular markers can be used to<br />
characterize germplasm, develop linkage maps, <strong>and</strong><br />
identify heterotic patterns. An underst<strong>and</strong>ing <strong>of</strong> the<br />
breeding material will allow breeders to select the<br />
appropriate parents to use in crosses. Usually, breeders<br />
select genetically divergent parents for crossing.<br />
Molecular characterization will help to select parents<br />
that are complementary at the genetic level. Molecular<br />
markers can be especially useful in identifying markers<br />
that co-segregate with QTLs (quantitative trait loci)<br />
to facilitate the breeding <strong>of</strong> polygenic traits.<br />
2 Rapid introgression <strong>of</strong> simply inherited traits.<br />
Introgression <strong>of</strong> genes into another genetic background<br />
involves several rounds <strong>of</strong> tedious backcrosses.<br />
When the source <strong>of</strong> desirable genes is a<br />
wild species, issues <strong>of</strong> linkage drag becomes more<br />
important because the dragged genes are <strong>of</strong>ten undesirable,<br />
requiring additional backcrosses to accomplish<br />
breeding objectives. Using markers <strong>and</strong> QTL<br />
analysis, the genome regions <strong>of</strong> the wild genotype<br />
containing the genes encoding the desirable trait<br />
can be identified more precisely, thereby reducing<br />
the fragment that needs to be introgressed, <strong>and</strong> consequently<br />
reducing linkage drag.<br />
3 Early generation testing. Unlike phenotypic markers<br />
that <strong>of</strong>ten manifest in the adult stage, molecular<br />
markers can be assayed at an early stage in the development<br />
<strong>of</strong> the plant. <strong>Breeding</strong> for compositional<br />
traits such as high lysine <strong>and</strong> high tryptophan genes<br />
in maize can be advanced with early detection <strong>and</strong><br />
selection <strong>of</strong> desirable segregants.<br />
4 Unconventional problem-solving. The use <strong>of</strong><br />
molecular markers can bring about novel ways <strong>of</strong><br />
solving traditional problems, or solving problems<br />
traditional breeding could not h<strong>and</strong>le. When linkage<br />
drag is recessive <strong>and</strong> tightly linked, numerous rounds<br />
<strong>of</strong> backcrosses may never detect <strong>and</strong> remove it.<br />
Disease resistance is <strong>of</strong>ten a recessive trait. When the