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Principles of Plant Genetics and Breeding

Principles of Plant Genetics and Breeding

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genotype is reduced. This raises the important issue <strong>of</strong><br />

adaptation because a breeder’s selection in one environment<br />

<strong>of</strong> superior performers may not hold true in<br />

another environment. By measuring the G × E interaction,<br />

the breeder will be better equipped to determine<br />

the best breeding strategy to use to develop the genotype<br />

that is most adapted to the target region.<br />

Classification <strong>of</strong> G × E interactions<br />

The type <strong>of</strong> G × E interaction influences the nature<br />

<strong>of</strong> the cultivar the breeder eventually releases for the<br />

production region. The environment, as previously<br />

described, can be complex, <strong>and</strong> so can the genotype <strong>of</strong><br />

the plant. Consequently, the biological basis <strong>of</strong> G × E<br />

interactions is complex by nature. Environmental factors<br />

are constantly changing. The interaction between the<br />

genotype (cultivar) <strong>and</strong> the environment is ongoing.<br />

As the number <strong>of</strong> environments (n) <strong>and</strong> number <strong>of</strong><br />

genotypes (m) increase, the number <strong>of</strong> possible G × E<br />

interactions is given by mn!/m!n! Of this, there is<br />

theoretically only one genotype that is the best performer<br />

under all environments, odds that make a search for it<br />

futile. Allard <strong>and</strong> Bradshaw classified this interaction<br />

into three common patterns using two genotypes (A, B)<br />

<strong>and</strong> two environments (E 1 , E 2 ) for a graphic illustration<br />

<strong>of</strong> the concept <strong>of</strong> G × E interaction. In statistical terms, a<br />

G × E interaction has occurred when the difference in<br />

performance between the two genotypes is inconsistent<br />

over the environment:<br />

Table 23.1 Demonstration <strong>of</strong> G × E interaction.<br />

PERFORMANCE EVALUATION FOR CROP CULTIVAR RELEASE 421<br />

A 1 − B 1 ≠ A 2 − B 2 [or A 1 − B 1 − (A 2 − B 2 ) ≠ 0]<br />

A G × E interaction exists when:<br />

A 1 − B 1 − A 2 + B 2 ≠ 0<br />

Three basic types <strong>of</strong> G × E interaction – no interaction,<br />

non-crossover interaction (quantitative interaction),<br />

<strong>and</strong> crossover interaction (qualitative interaction) –<br />

are recognized. A numerical example can be used to<br />

distinguish these classes <strong>of</strong> interactions (Table 23.1). A<br />

graphic illustration may also be used to demonstrate the<br />

nature <strong>of</strong> these interactions (Figure 23.1). Consider two<br />

genotypes, A <strong>and</strong> B, in a field trial analysis.<br />

1 No G × E interaction. A no G × E interaction occurs<br />

when one genotype (e.g., A) consistently performs<br />

better than the other genotype (B) by about the same<br />

amount across all the environments included in the test:<br />

2 A non-crossover G × E interaction. A noncrossover<br />

G × E interaction is said to occur when a<br />

genotype (A) consistently outperforms genotype B,<br />

across the entire test environment. However, the<br />

differential performance is not the same across the<br />

environment. That is, whereas there is no change in<br />

rank, genotype A may exceed genotype B by 20 units<br />

in one environment <strong>and</strong> 60 units in another.<br />

3 A crossover G × E interaction. This is the most<br />

important G × E interaction to plant breeders. A<br />

crossover G × E interaction occurs when a genotype<br />

(A) is more productive in one environment, but a<br />

No interaction Environment 1 Environment 2 Difference<br />

Genotype A 10 14 +4<br />

Genotype B 16 20 +4<br />

Difference +6 +6<br />

Non-crossover interaction Environment 1 Environment 2 Difference<br />

Genotype A 10 14 +4<br />

Genotype B 16 24 +8<br />

Difference +6 +10<br />

Crossover interaction Environment 1 Environment 2 Difference<br />

Genotype A 16 14 –2<br />

Genotype B 10 20 +10<br />

Difference –6 +6

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