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Principles of Plant Genetics and Breeding

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24 CHAPTER 2<br />

Table 2.1 Characteristics <strong>of</strong> domestication syndrome traits.<br />

General effect<br />

Increased seedling vigor (more plants germinating)<br />

Modified reproductive system<br />

Increased number <strong>of</strong> seeds harvested<br />

Increased appeal to consumers<br />

Altered plant architecture <strong>and</strong> growth habit<br />

traits such as flowering time, seed size, <strong>and</strong> seed dispersal<br />

in maize, rice, <strong>and</strong> sorghum; <strong>and</strong> growth habit,<br />

photoperiod sensitivity, <strong>and</strong> dormancy in common<br />

bean. Furthermore, linkage blocks <strong>of</strong> adaptation traits<br />

have been found in some species. A study by E. M. K.<br />

Koinange <strong>and</strong> collaborators indicated that the domestication<br />

syndrome genes in common bean were primarily<br />

clustered in three genomic locations, one for growth<br />

habit <strong>and</strong> flowering time, a second for seed dispersal <strong>and</strong><br />

dormancy, <strong>and</strong> a third for pod <strong>and</strong> seed size.<br />

The domestication process essentially makes plants<br />

more dependent on humans for survival. Consequently,<br />

a difference between domesticates <strong>and</strong> their wild progenitors<br />

is the lack <strong>of</strong> traits that ensure survival in the<br />

wild. Such traits include dehiscence, dormancy, <strong>and</strong><br />

thorns. <strong>Plant</strong>s that dehisce their seeds can invade new<br />

areas for competitive advantage. However, in modern<br />

cultivation, dehiscence or shattering is undesirable<br />

because seeds are lost to harvesting when it occurs.<br />

Some directions in the changes in plant domesticates<br />

have been dictated by the preferences <strong>of</strong> consumers.<br />

Wild tomato (Pinpenifolium) produces numerous tiny<br />

<strong>and</strong> hard fruits that are advantageous in the wild for survival.<br />

However, consumers prefer succulent <strong>and</strong> juicy<br />

fruits. Consequently, domesticated tomato (whether<br />

small or large fruited) is juicy <strong>and</strong> succulent. Thorns<br />

protect against predators in the wild, but are a nuisance<br />

to modern uses <strong>of</strong> plants. Hence, varieties <strong>of</strong> ornamentals<br />

such as roses that are grown for cut flowers are<br />

thornless.<br />

Specific traits altered<br />

Loss <strong>of</strong> seed or tuber dormancy<br />

Large seeds<br />

Increased selfing<br />

Vegetatively reproducing plants<br />

Altered photoperiod sensitivity<br />

Non-shattering<br />

Reduced number <strong>of</strong> branches (more fruits per branch)<br />

Attractive fruit/seed colors <strong>and</strong> patterns<br />

Enhanced flavor, texture, <strong>and</strong> taste <strong>of</strong> seeds/fruits/tubers (food parts)<br />

Reduced toxic principles (safer food)<br />

Larger fruits<br />

Reduced spikiness<br />

Compact growth habit (determinacy, reduced plant size, dwarfism)<br />

Reduced branching<br />

The art <strong>and</strong> science <strong>of</strong> plant breeding<br />

The early domesticators relied solely on experience <strong>and</strong><br />

intuition to select <strong>and</strong> advance plants they thought had<br />

superior qualities. As knowledge abounds <strong>and</strong> technology<br />

advances, modern breeders are increasingly depending<br />

on science to take the guesswork out <strong>of</strong> the selection<br />

process, or at least to reduce it. At the minimum, a plant<br />

breeder should have a good underst<strong>and</strong>ing <strong>of</strong> genetics<br />

<strong>and</strong> the principles <strong>and</strong> concepts <strong>of</strong> plant breeding, hence<br />

the emphasis <strong>of</strong> both disciplines in this book.<br />

Art <strong>and</strong> the concept <strong>of</strong> the “breeder’s eye”<br />

<strong>Plant</strong> breeding is an applied science. Just like other nonexact<br />

science disciplines or fields, art is important to the<br />

success achieved by a plant breeder. It was previously<br />

stated in Chapter 1 that early plant breeders depended<br />

primarily on intuition, skill, <strong>and</strong> judgment in their work.<br />

These attributes are still desirable in modern day plant<br />

breeding. This book discusses the various tools available<br />

to plant breeders. <strong>Plant</strong> breeders may use different tools<br />

to tackle the same problem, the results being the arbiter<br />

<strong>of</strong> the wisdom in the choices made. In fact, it is possible<br />

for different breeders to use the same set <strong>of</strong> tools to<br />

address the same kind <strong>of</strong> problem with different results,<br />

due in part to the difference in skill <strong>and</strong> experience.<br />

As will be discussed later in the book, some breeding<br />

methods depend on phenotypic selection. This calls<br />

for the proper design <strong>of</strong> the field test to minimize the

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