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Book of Abstracts (PDF) - International Mycological Association

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IMC7 Monday August 12th Lectures<br />

68 - Resolving the identification <strong>of</strong> P. glabrum, P.<br />

purpurogenum, P. thomii and Eupenicillium lapidosum<br />

S. Peterson<br />

USDA-ARS-NCAUR, 1815 N. University Street, Peoria, IL<br />

61604, U.S.A. - E-mail: peterssw@mail.ncaur.usda.gov<br />

The identification <strong>of</strong> Penicillium glabrum and other closely<br />

related species presents a challenge to mycologists because<br />

<strong>of</strong> the phenotypic similarity <strong>of</strong> these species. To address<br />

this problem, DNA sequences from ITS, beta-tubulin,<br />

calmodulin and translation elongation factor 1 alpha were<br />

determined from ex type and other isolates belonging to P.<br />

glabrum, P. thomii, P. yezoense, P. grancanaraie, P.<br />

baiiolum, P. palmense, P. trzebinskii, P. terlikowskii, P.<br />

purpurescens, P. viridoalbus, P. oledskii and Eupenicillium<br />

lapidosum. Prior studies showed that in the ITS region,<br />

total variation among these species is two base<br />

substitutions, although some <strong>of</strong> these species may be<br />

synonyms. Ex-type isolates <strong>of</strong> E. lapidosum and P. thomii<br />

had identical sequences in ITS, CF, EF1 and BT; P.<br />

viridoalbus and P. purpurescens were identical at 3 loci<br />

and differed by a single base at the other suggesting<br />

synonymies in each case. Penicillium spinulosum also<br />

resembles P. glabrum and is closely related. However, it is<br />

a genetically and phenotypically distinct species. The<br />

pattern <strong>of</strong> genetic variability at multiple loci suggests a<br />

complex <strong>of</strong> variable and closely related species centered on<br />

P. glabrum.<br />

69 - Species delimitation <strong>of</strong> Penicillia and Aspergilli;<br />

dilemma's between phenotypic and molecular<br />

characterization<br />

R.A. Samson<br />

Centraalbureau voor Schimmelcultures, PO Box 85167,<br />

3508 AD Utrecht, The Netherlands. - E-mail:<br />

samson@cbs.knaw.nl<br />

The taxonomy <strong>of</strong> Penicillium and Aspergillus and their<br />

teleomorphs has been subject to various methods <strong>of</strong><br />

investigations. With the classical morphological<br />

approaches using characters <strong>of</strong> conidiophores, conidia and<br />

sexual propagules, delimitation <strong>of</strong> many taxa has been<br />

unclear and debatable. Introduction <strong>of</strong> physiological and<br />

culture criteria has only contributed little, particularly<br />

because standardisation <strong>of</strong> media for cultivating<br />

Penicillium and Aspergillus remains problematic. On the<br />

other hand chemotaxonomic pr<strong>of</strong>iles <strong>of</strong> secondary<br />

metabolites are promising showing fine distinction <strong>of</strong> taxa.<br />

With the introduction <strong>of</strong> various molecular tools<br />

delimitation <strong>of</strong> taxa have been solved, although one<br />

particular method does not always apply for all taxa <strong>of</strong> both<br />

genera resulting in different taxonomies. In some cases it is<br />

difficult to show similarities between the phenotypic and<br />

molecular characterization. This is particular true for<br />

important groups such as Aspergillus section Nigri and<br />

Penicillium subgenus Penicillium. Species <strong>of</strong> these groups<br />

are economically important and correct identification is<br />

crucial. In this paper examples with taxonomic constraints<br />

are discussed.<br />

70 - A polyphasic taxonomic study <strong>of</strong> Fusarium<br />

avenaceum and F. tricinctum<br />

K.A. Seifert 1* , U. Thrane 2 , J. Bissett 1 , B. Blackwell 1 & J.<br />

McDonald 3<br />

1 Eastern Cereal and Oilseed Research Centre, Agriculture<br />

& Agri-Food Canada, 960 Carling Ave., Ottawa, K1A 0C6,<br />

Canada. - 2 Mycology Group, BioCentrum-DTU, Technical<br />

University <strong>of</strong> Denmark, Sølt<strong>of</strong>ts Plads, Building 221, DK-<br />

2800 Kgs. Lyngby, Denmark. - 3 Centre for Plant<br />

Quarantine Pests, Canadian Food Inspection Agency, 3851<br />

Fallowfield Road, Ottawa, Ontario, K2H 8P9, Canada. -<br />

E-mail: seifertk@em.agr.ca<br />

A common set <strong>of</strong> 50 strains <strong>of</strong> Fusarium avenaceum, F.<br />

tricinctum and F. stilboides were examined by colony<br />

characters, image analysis <strong>of</strong> sporodochial conidia and<br />

conidia from the aerial mycelium, substrate utilization<br />

pr<strong>of</strong>iles (BIOLOG), rep-PCR (BOX, ERIC, REP primers),<br />

DNA sequencing (beta-tubulin, elongation factor 1-alpha)<br />

and metabolite pr<strong>of</strong>iling (HPLC, NMR). In general, DNA<br />

sequencing and rep-PCR results resulted in identical<br />

branching patterns in dendrograms. BIOLOG and rep-PCR<br />

detected more strain-level variation than DNA sequencing,<br />

but the BIOLOG phenogram differed in several respects<br />

from the molecular phylograms. Most strains identified as<br />

F. avenaceum (or its putative synonym F.<br />

arthrosporioides) clustered together in the molecular<br />

analyses, but two small groups <strong>of</strong> strains, one from<br />

Australia and the other from New Zealand, may represent<br />

distinct phylogenetic species. A population isolated from<br />

Turkish wheat formed a distinct cluster. F. tricinctum and<br />

F. stilboides formed distinct clusters except for a single<br />

identified strain <strong>of</strong> each species that appeared to be more<br />

distantly related. Representative strains <strong>of</strong> two subspecies<br />

<strong>of</strong> F. avenaceum subsp. aywerte and subsp. nurragi, were<br />

distantly related to F. avenaceum subsp. avenaceum and<br />

probably represent distinct species. Analyses <strong>of</strong> combined<br />

data sets and correlations between molecular,<br />

morphological and physiological data sets will be used to<br />

refine species concepts for these taxa.<br />

71 - Towards a polyphasic and predictive taxonomy for<br />

small-spored Alternaria<br />

B. Andersen 1* & R.G. Roberts 2<br />

1 BioCentrum-DTU, Building 221, Technical University <strong>of</strong><br />

Denmark, DK-2800, Kgs. Lyngby, Denmark. - 2 USDA,<br />

ARS, Tree Fruit Research Laboratory, 1104 N. western<br />

Avenue, Wenatchee, WA 98801, U.S.A. - E-mail:<br />

ba@biocentrum.dtu.dk<br />

<strong>Book</strong> <strong>of</strong> <strong>Abstracts</strong> 23

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