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Living Image 3.1

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<strong>Living</strong> <strong>Image</strong> ® Software User’s Manual<br />

Parameters Tab<br />

wavelength data adds to the analysis. The recommended wavelengths are 580-640 nm for<br />

tissue and 560-620 nm for the Xenogen XPM-2 tissue phantom.<br />

Minimum Radiance<br />

The minimum radiance determines the lower radiance [photons/sec/cm 2/sr] threshold of<br />

the data to be used in the DLIT/FLIT analysis.<br />

The software automatically computes a default minimum radiance value and this is the<br />

recommended starting point for an analysis. If too much noise is included in the<br />

analysis, increase the minimum radiance value.<br />

An optimum minimum radiance value can be evaluated by viewing the image data in<br />

photon units (photons/sec/cm 2/sr) and adjusting the color bar Min to be above the level<br />

of noise in the image.<br />

Figure H.6 3D reconstruction tools, Parameters tab, DLIT (left) and FLIT (right)<br />

Angle Limit<br />

The angle limit refers to the angle between the object surface normal and the optical<br />

axis. The optical axis can be considered to be a line perpendicular to the stage. The<br />

surface normal is a line perpendicular to a plane tangent to the surface point. For<br />

example, in a dorsal view of a mouse, the highest point on its back would have a normal<br />

line perpendicular to the stage. In this case the angle is zero. The side of a mouse<br />

abdomen would have a normal line parallel to the stage, so the angle here would be close<br />

to 90° .<br />

The software uses luminescent image data for surface elements that are less than the<br />

angle limit. The default angle limit setting is 70° for the IVIS ® Imaging System 200<br />

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