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netLibrary - eBook Summary Structure-based Drug Design by ...

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Page 334<br />

For example, in the specificity subsite S 3 the phenyl rings of Phe P 3 occupy almost identical positions in<br />

both renin inhibitor complexes. Modeling studies have predicted the specificity subsite S 3 to be larger in<br />

renins than in other aspartic proteinases [4] due to substitution of smaller residues, Pro 111, Leu114, and<br />

Ala115, in place of larger ones in mammalian and fungal proteinases. However, a compensatory<br />

movement of a helix (h N2) makes the pocket quite compact and complementary to the aromatic ring as<br />

shown in Figure 5. Thus, the positions of an element of secondary structure differ between renin and<br />

other aspartic proteinases with a consequent important difference in the specificity pocket.<br />

The differing positions of secondary structural elements may also account for the specificities at P 2'.<br />

Mouse submaxillary and other nonprimate renins do not appreciably cleave human angiotensinogen or<br />

its analogs [46], which have an isoleucine at P 2', although they do cleave substrates with a valine at this<br />

position. In contrast, human renin not only cleaves the human and nonprimate substrates but also the rat<br />

angiotensinogen with tyrosine at P 2', albeit rather slowly [47]. This can be explained in terms of the threedimensional<br />

structures. In the mouse renin complex, the P 2' tyrosyl ring is packed parallel to an<br />

adjoining helix (h 3) in a narrow pocket and there is only limited space available beyond the Cβ<br />

methylene group. This appears to be able to accommodate a valine, but not the larger isoleucine at P 2',<br />

which will suffer greater steric interference from several residues that are conserved in identity and<br />

position in the two renins. On the other hand, in human renin differences in the orientation and position<br />

of<br />

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