MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

Recommendations

Info

Data Management and Compiling Databases Dendrogram numbering: �The number in ( ) is one less that the corresponding number found in the data file record. �The numbering here begins with 0 �Data file numbering begins with 1 2. The screen shows a dendrogram of your ID. CLUSTER MENU (TEXT) 3. Click on the black line below or above the dendrogram to scroll. 4. Click the Cluster Menu (Graphics) tab to view one-dimensional, two-dimensional, and three-dimensional cluster analyses. ONE-DIMENSIONAL (1-D) CLUSTER ANALYSIS Section 7 � Page 24 MicroStation System/MicroLog User Guide Apr 07
Data Management and Compiling Databases TWO-DIMENSIONAL (2-D) CLUSTER ANALYSIS THREE-DIMENSIONAL (3-D) CLUSTER ANALYSIS 5. Design your cluster according to your preferences. • Select B/W for a black and white representation. • Select Copy to paste your cluster into a text document (print screen). Note: Copy to Paint and use the cut and paste feature to place a “cluster only” picture into a Word document. • Select Color to choose the color scheme you want. • Select Big to enlarge your species. • Select Small to shrink your cluster. MicroStation System/MicroLog User Guide Apr 07 Section 7 � Page 25
Page 1 and 2:
MicroStation System MicroLog Versi
Page 3 and 4:
LICENSE AGREEMENT Notice: This is a
Page 5 and 6:
Table of Contents Section Title 1.
Page 7 and 8:
10. Frequently Asked Questions…
Page 9 and 10:
Welcome Section 1 � Page 2 Connec
Page 11 and 12:
2. Installation and Registration In
Page 13 and 14:
Installation and Registration The A
Page 15 and 16:
8. E-mail the User Key File to tech
Page 17 and 18:
MicroStation System/MicroLog Overvi
Page 19 and 20:
Follow directions closely to obtain
Page 21 and 22:
Page 23 and 24:
Page 25 and 26:
Page 27 and 28:
Page 29 and 30:
Preparing Samples Preparing an inoc
Page 31 and 32:
Preparing Samples Recognizing fasti
Page 33 and 34:
Preparing Samples Media shorthand:
Page 35 and 36:
Preparing Samples Don’t forget to
Page 37 and 38:
Preparing Samples b. Use a sterile
Page 39 and 40:
Preparing Samples aids in liquefyin
Page 41 and 42:
Preparing Samples Caution! Pipet th
Page 43 and 44:
Preparing Samples Special Procedure
Page 45 and 46:
Preparing Samples Initial culture m
Page 47 and 48:
Reading MicroPlates Set Up tab Sele
Page 49 and 50:
Reading MicroPlates When you’re e
Page 51 and 52:
Reading MicroPlates 2. Enter reacti
Page 53 and 54:
Reading MicroPlates Entering sample
Page 55 and 56: Reading MicroPlates Select file nam
Page 57 and 58: Reading MicroPlates Naming Workshee
Page 59 and 60: Reading MicroPlates This arrow show
Page 61 and 62: Reading MicroPlates Using Worksheet
Page 63 and 64: Reading MicroPlates 4. Click Save t
Page 65 and 66: Reading MicroPlates Wells with high
Page 67 and 68: Reading MicroPlates Exiting When yo
Page 69 and 70: Interpreting Results Understanding
Page 71 and 72: Interpreting Results Mismatch Type
Page 73 and 74: Interpreting Results What are those
Page 75 and 76: Interpreting Results NOTE: A1 value
Page 77 and 78: Interpreting Results Slide the scro
Page 79 and 80: Interpreting Results VS. CURRENT MI
Page 81 and 82: Interpreting Results “Other” fi
Page 83 and 84: Data Management and Compiling Datab
Page 85 and 86: Combining Data Files Data Managemen
Page 87 and 88: OK, Out, Hold, Atypical Sorting lab
Page 89 and 90: Remember! When building your own da
Page 93 and 94: DATABASE WINDOW Data Management and
Page 97 and 98: Arrow indicates selected entry Data
Page 103 and 104: Export Help Mark this choice if you
Page 105: Data Management and Compiling Datab
Page 109 and 110: 8. Administration and Security In t
Page 111 and 112: Important! • If you test Password
Page 113 and 114: Log-In Privileges Administration an
Page 115 and 116: Remember that the password must be
Page 117 and 118: 9. Technical Notes In this section:
Page 119 and 120: Making Biolog Universal Growth Agar
Page 121 and 122: � � � � Technical Notes Gen
Page 123 and 124: 10. Frequently Asked Questions In t
Page 125 and 126: Q A Q A Q A Frequently Asked Questi
Page 127 and 128: Troubleshooting Symptom Cause Solut
Page 129 and 130: Troubleshooting Preparing Inocula S
Page 131 and 132: Troubleshooting MicroStation Reader
Page 133 and 134: Glossary Dendrogram Cluster diagram
Page 135 and 136: Glossary Spore, fungal Sterile, fun
Page 137 and 138: Culture Media Atmosphere Temperatur
Page 139 and 140: Appendices: Notes Notes: Section 13
Page 141 and 142: Appendix 4: Database Species Lists
Page 157 and 158:
Appendix 4: Database Species Lists
Page 159 and 160:
Page 161 and 162:
Page 163 and 164:
Page 165 and 166:
Page 167 and 168:
Page 169 and 170:
Page 171 and 172:
Page 173 and 174:
Page 175 and 176:
Appendix 5: Program Printouts Appen
Page 177 and 178:
Appendix 5: Program Printouts 1�
Page 179 and 180:
Appendix 5: Program Printouts Funga
Page 181 and 182:
Appendix 5: Program Printouts Print
Page 183 and 184:
Page 185 and 186:
Page 187 and 188:
Appendix 6: Dangerous Pathogens (DP
show all

MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

Create successful ePaper yourself

Delete template?

Save as template?