MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

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Data Management and Compiling Databases 4. In the Data To Include section, enable check marks in the desired box(es). (See pages 7.4-7.6 for the Edit In/Out process). OK (to include records designated OK) Hold (to include records designated Hold) Atypical (to include records designated Atypical) Out (to include records designated Out) 6. In the What Processing To Do section: • Enable the check mark next to Make Index Files (this must be enabled to use the rest of this feature below). • Enable Make ID Files to make your own database. • If you are compiling files with GN, GP, or AN plate types, the window below opens. COMPILE/INDEX/DATA WINDOWS (FOR GN/GP/AN PLATE TYPES) • If the file you are compiling contains YT or FF MicroPlate data, you must specify the incubation time for the data you are compiling. If the file contains several incubation times, select All. The software will compile the entries by strain name and automatically make an endpoint database for each incubation time. For further information, follow the on-screen instructions. Section 7 � Page 8 MicroStation System/MicroLog User Guide Apr 07
Data Management and Compiling Databases COMPILE/INDEX/DATA WINDOWS (FOR YT/FF PLATE TYPES) • Click Go to compile database. • Indication bars at the bottom of the window show compilation progress. • The Progressive database file will have the same name as your data file, with a “.KID” extension (GN,GP, and AN files) and the Endpoint database file, with a “EID” extension (YT and FF files). The user databases are saved as read only files. 7. Click the Index tab on the Compile/View Data File window to show the Index window. • You will be able to view a data file list by Sample Number, Strain Name, or Strain Number. Click the desired radio button and the list will change accordingly. • Click Page Up or Page Down or use the scroll bar to view the entire list. • To view an entry more closely, click on a row, then click the Data tab at the top of the page. MicroStation System/MicroLog User Guide Apr 07 Section 7 � Page 9
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MicroStation System MicroLog Versi
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LICENSE AGREEMENT Notice: This is a
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Table of Contents Section Title 1.
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10. Frequently Asked Questions…
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Welcome Section 1 � Page 2 Connec
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2. Installation and Registration In
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Installation and Registration The A
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8. E-mail the User Key File to tech
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MicroStation System/MicroLog Overvi
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Follow directions closely to obtain
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Preparing Samples Preparing an inoc
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Preparing Samples Recognizing fasti
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Preparing Samples Media shorthand:
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Preparing Samples Don’t forget to
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Preparing Samples b. Use a sterile
Page 39 and 40: Preparing Samples aids in liquefyin
Page 41 and 42: Preparing Samples Caution! Pipet th
Page 43 and 44: Preparing Samples Special Procedure
Page 45 and 46: Preparing Samples Initial culture m
Page 47 and 48: Reading MicroPlates Set Up tab Sele
Page 49 and 50: Reading MicroPlates When you’re e
Page 51 and 52: Reading MicroPlates 2. Enter reacti
Page 53 and 54: Reading MicroPlates Entering sample
Page 55 and 56: Reading MicroPlates Select file nam
Page 57 and 58: Reading MicroPlates Naming Workshee
Page 59 and 60: Reading MicroPlates This arrow show
Page 61 and 62: Reading MicroPlates Using Worksheet
Page 63 and 64: Reading MicroPlates 4. Click Save t
Page 65 and 66: Reading MicroPlates Wells with high
Page 67 and 68: Reading MicroPlates Exiting When yo
Page 69 and 70: Interpreting Results Understanding
Page 71 and 72: Interpreting Results Mismatch Type
Page 73 and 74: Interpreting Results What are those
Page 75 and 76: Interpreting Results NOTE: A1 value
Page 77 and 78: Interpreting Results Slide the scro
Page 79 and 80: Interpreting Results VS. CURRENT MI
Page 81 and 82: Interpreting Results “Other” fi
Page 83 and 84: Data Management and Compiling Datab
Page 85 and 86: Combining Data Files Data Managemen
Page 87 and 88: OK, Out, Hold, Atypical Sorting lab
Page 89: Remember! When building your own da
Page 93 and 94: DATABASE WINDOW Data Management and
Page 97 and 98: Arrow indicates selected entry Data
Page 103 and 104: Export Help Mark this choice if you
Page 109 and 110: 8. Administration and Security In t
Page 111 and 112: Important! • If you test Password
Page 113 and 114: Log-In Privileges Administration an
Page 115 and 116: Remember that the password must be
Page 117 and 118: 9. Technical Notes In this section:
Page 119 and 120: Making Biolog Universal Growth Agar
Page 121 and 122: � � � � Technical Notes Gen
Page 123 and 124: 10. Frequently Asked Questions In t
Page 125 and 126: Q A Q A Q A Frequently Asked Questi
Page 127 and 128: Troubleshooting Symptom Cause Solut
Page 129 and 130: Troubleshooting Preparing Inocula S
Page 131 and 132: Troubleshooting MicroStation Reader
Page 133 and 134: Glossary Dendrogram Cluster diagram
Page 135 and 136: Glossary Spore, fungal Sterile, fun
Page 137 and 138: Culture Media Atmosphere Temperatur
Page 139 and 140: Appendices: Notes Notes: Section 13
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Appendix 4: Database Species Lists
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Appendix 5: Program Printouts Appen
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Appendix 5: Program Printouts 1�
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Appendix 5: Program Printouts Funga
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Appendix 5: Program Printouts Print
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Appendix 6: Dangerous Pathogens (DP
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