MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

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SPECIFIC PATTERN WINDOW Interpreting Results Vs. current MicroPlate This display shows a graphical representation of the pattern for the species at a specific level of positive reactions versus the MicroPlate currently on the Data window. The circle at the left of each box represents the reactions in the current MicroPlate. The bar at the right of each box represents the percent of times the species is positive at the given level of positive reactions. • Slide the scroll bar left and right to see the animation of the metabolic progression for that species. • Purple indicates positive wells. • Teal represents borderline well reactions. • Empty boxes are always negative. • The display shows major mismatches between the current MicroPlate and the species, at the current level of positive reactions. • If you set the number of positive reactions to be equal to the number of positive reactions in the current MicroPlate, you can see how the ID search treats the match between your MicroPlate and the displayed species. MicroStation System/MicroLog User Guide Apr 07 Section 6 � Page 11
Interpreting Results VS. CURRENT MICROPLATE WINDOW Using Macroscopic and Microscopic Pictures You can access macroscopic and microscopic species of selected fungi in the MicroLog photo library of the FF database. 1. From the Data window, click the View Database selection bar. The Database List appears. This is a species list from the database based on strain type last selected on the Data screen. 2. Click the Database Options tab and select the database you want to view, based on strain type. 3. Click back to the Database List. Click Page Up or Page Down or use the scroll bar to move through the list. 4. Click on the row containing the species you want. 5. The End-Point, Micro Pictures, and Macro Pictures tabs appear. 6. Click on the Macro or Micro tab to access the photo library. MACRO AND MICRO TABS ON DATABASE DATA WINDOW Section 6 � Page 12 MicroStation System/MicroLog User Guide Apr 07
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MicroStation System MicroLog Versi
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LICENSE AGREEMENT Notice: This is a
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Table of Contents Section Title 1.
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10. Frequently Asked Questions…
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Welcome Section 1 � Page 2 Connec
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2. Installation and Registration In
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Installation and Registration The A
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8. E-mail the User Key File to tech
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MicroStation System/MicroLog Overvi
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Follow directions closely to obtain
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Page 29 and 30: Preparing Samples Preparing an inoc
Page 31 and 32: Preparing Samples Recognizing fasti
Page 33 and 34: Preparing Samples Media shorthand:
Page 35 and 36: Preparing Samples Don’t forget to
Page 37 and 38: Preparing Samples b. Use a sterile
Page 39 and 40: Preparing Samples aids in liquefyin
Page 41 and 42: Preparing Samples Caution! Pipet th
Page 43 and 44: Preparing Samples Special Procedure
Page 45 and 46: Preparing Samples Initial culture m
Page 47 and 48: Reading MicroPlates Set Up tab Sele
Page 49 and 50: Reading MicroPlates When you’re e
Page 51 and 52: Reading MicroPlates 2. Enter reacti
Page 53 and 54: Reading MicroPlates Entering sample
Page 55 and 56: Reading MicroPlates Select file nam
Page 57 and 58: Reading MicroPlates Naming Workshee
Page 59 and 60: Reading MicroPlates This arrow show
Page 61 and 62: Reading MicroPlates Using Worksheet
Page 63 and 64: Reading MicroPlates 4. Click Save t
Page 65 and 66: Reading MicroPlates Wells with high
Page 67 and 68: Reading MicroPlates Exiting When yo
Page 69 and 70: Interpreting Results Understanding
Page 71 and 72: Interpreting Results Mismatch Type
Page 73 and 74: Interpreting Results What are those
Page 75 and 76: Interpreting Results NOTE: A1 value
Page 77: Interpreting Results Slide the scro
Page 81 and 82: Interpreting Results “Other” fi
Page 83 and 84: Data Management and Compiling Datab
Page 85 and 86: Combining Data Files Data Managemen
Page 87 and 88: OK, Out, Hold, Atypical Sorting lab
Page 89 and 90: Remember! When building your own da
Page 93 and 94: DATABASE WINDOW Data Management and
Page 97 and 98: Arrow indicates selected entry Data
Page 103 and 104: Export Help Mark this choice if you
Page 109 and 110: 8. Administration and Security In t
Page 111 and 112: Important! • If you test Password
Page 113 and 114: Log-In Privileges Administration an
Page 115 and 116: Remember that the password must be
Page 117 and 118: 9. Technical Notes In this section:
Page 119 and 120: Making Biolog Universal Growth Agar
Page 121 and 122: � � � � Technical Notes Gen
Page 123 and 124: 10. Frequently Asked Questions In t
Page 125 and 126: Q A Q A Q A Frequently Asked Questi
Page 127 and 128: Troubleshooting Symptom Cause Solut
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Troubleshooting Preparing Inocula S
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Troubleshooting MicroStation Reader
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Glossary Dendrogram Cluster diagram
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Glossary Spore, fungal Sterile, fun
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Culture Media Atmosphere Temperatur
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Appendices: Notes Notes: Section 13
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Appendix 4: Database Species Lists
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Appendix 5: Program Printouts Appen
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Appendix 5: Program Printouts 1�
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Appendix 5: Program Printouts Funga
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Appendix 5: Program Printouts Print
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Appendix 6: Dangerous Pathogens (DP
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MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

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