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MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

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Caution!<br />

Manually adjusting<br />

thresholds will<br />

change SIM and<br />

DIST values. These<br />

changes override<br />

automatic<br />

thresholds. This is<br />

an advanced<br />

technique. Call<br />

Biolog Technical<br />

Service if you need<br />

help.<br />

Reading MicroPlates<br />

• Click Read Next to sequentially read the next MicroPlate on<br />

the worksheet without returning to the Worksheet window.<br />

• A Confirmation window appears. Click OK if it displays the<br />

MicroPlate you want to read. The reader calibrates itself,<br />

pulls the MicroPlate inside, takes a reading, displays the<br />

result on the Data window, and ejects the MicroPlate.<br />

• If necessary, click Cancel to return to the Data window.<br />

8. Click Print to print the report (if you did not select Automatic<br />

Printout).<br />

9. Click Save to save data (if you did not select Auto Write to Data<br />

file.) A Confirmation window appears.<br />

10. Repeat Steps 5-9 for all MicroPlates.<br />

Adjusting Thresholds Manually<br />

The software allows you to view histograms of MicroPlate patterns. In<br />

most cases, use of this feature should not be necessary to obtain<br />

accurate results. However, this advanced technique can be useful if<br />

you feel that the automatic reading of your MicroPlate does not match<br />

your visual interpretation. You can adjust either or both of the<br />

thresholds to override the automatic reading and obtain what you feel<br />

is the correct result. You can only adjust thresholds in Reader mode<br />

and for only GN, GP and AN plates<br />

1. Click on the small DW Data tab at the upper right edge of your<br />

on-screen Microplate (on the Data window). You’ll see an onscreen<br />

MicroPlate of your sample, showing optical densities.<br />

2. Click the DW Histogram tab. A histogram of the current ID<br />

selection appears.<br />

3. The histogram is divided into three lateral sections, which<br />

represent color distribution within the MicroPlate. Wells with low<br />

and high color density are on the left and right sides of the<br />

histogram. The middle section (between the two vertical lines)<br />

represents wells with borderline reactions.<br />

<strong>MicroStation</strong> <strong>System</strong>/<strong>MicroLog</strong> User Guide Apr 07 Section 5 � Page 19

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