MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

Recommendations

Info

MicroStation System/MicroLog Overview Using worksheets Worksheets allow you to enter all of your sample identifiers ahead of time. This speeds the reading process and enables you to read high MicroPlate volumes more efficiently. WORKSHEET (WITH SAMPLE ENTRIES) FOR BATCHING MICROPLATES Saving data You can save your results into files and manage them by using the Output options on the Set Up window. FIELDS FOR NAMING AND SAVING FILES File output area Section 3 � Page 8 MicroStation System/MicroLog User Guide Nov 07
MicroStation System/MicroLog Overview Editing files and building databases You can also select which database you want to use – Biolog’s or your own. Advanced Data Management functions allow you to view data by strain or plate type, edit data files, build your database, and perform a number of other database management techniques. DATABASE MANAGEMENT WINDOW (FOR ADVANCED DATABASE FUNCTIONS) Adjusting thresholds Another software advanced feature for bacteria is the capability of adjusting thresholds by using histograms. This function may be appropriate if you feel that the automatic reading of your MicroPlate does not match your visual interpretation. HISTOGRAM AND MICROPLATE DATA (FOR MANUAL ADJUSTMENT OF THRESHOLDS) MicroStation System/MicroLog User Guide Nov 07 Section 3 � Page 9
Page 1 and 2: MicroStation System MicroLog Versi
Page 3 and 4: LICENSE AGREEMENT Notice: This is a
Page 5 and 6: Table of Contents Section Title 1.
Page 7 and 8: 10. Frequently Asked Questions…
Page 9 and 10: Welcome Section 1 � Page 2 Connec
Page 11 and 12: 2. Installation and Registration In
Page 13 and 14: Installation and Registration The A
Page 15 and 16: 8. E-mail the User Key File to tech
Page 17 and 18: MicroStation System/MicroLog Overvi
Page 19 and 20: Follow directions closely to obtain
Page 23: MicroStation System/MicroLog Overvi
Page 29 and 30: Preparing Samples Preparing an inoc
Page 31 and 32: Preparing Samples Recognizing fasti
Page 33 and 34: Preparing Samples Media shorthand:
Page 35 and 36: Preparing Samples Don’t forget to
Page 37 and 38: Preparing Samples b. Use a sterile
Page 39 and 40: Preparing Samples aids in liquefyin
Page 41 and 42: Preparing Samples Caution! Pipet th
Page 43 and 44: Preparing Samples Special Procedure
Page 45 and 46: Preparing Samples Initial culture m
Page 47 and 48: Reading MicroPlates Set Up tab Sele
Page 49 and 50: Reading MicroPlates When you’re e
Page 51 and 52: Reading MicroPlates 2. Enter reacti
Page 53 and 54: Reading MicroPlates Entering sample
Page 55 and 56: Reading MicroPlates Select file nam
Page 57 and 58: Reading MicroPlates Naming Workshee
Page 59 and 60: Reading MicroPlates This arrow show
Page 61 and 62: Reading MicroPlates Using Worksheet
Page 63 and 64: Reading MicroPlates 4. Click Save t
Page 65 and 66: Reading MicroPlates Wells with high
Page 67 and 68: Reading MicroPlates Exiting When yo
Page 69 and 70: Interpreting Results Understanding
Page 71 and 72: Interpreting Results Mismatch Type
Page 73 and 74: Interpreting Results What are those
Page 75 and 76:
Interpreting Results NOTE: A1 value
Page 77 and 78:
Interpreting Results Slide the scro
Page 79 and 80:
Interpreting Results VS. CURRENT MI
Page 81 and 82:
Interpreting Results “Other” fi
Page 83 and 84:
Data Management and Compiling Datab
Page 85 and 86:
Combining Data Files Data Managemen
Page 87 and 88:
OK, Out, Hold, Atypical Sorting lab
Page 89 and 90:
Remember! When building your own da
Page 91 and 92:
Page 93 and 94:
DATABASE WINDOW Data Management and
Page 95 and 96:
Page 97 and 98:
Arrow indicates selected entry Data
Page 99 and 100:
Page 101 and 102:
Page 103 and 104:
Export Help Mark this choice if you
Page 105 and 106:
Page 107 and 108:
Page 109 and 110:
8. Administration and Security In t
Page 111 and 112:
Important! • If you test Password
Page 113 and 114:
Log-In Privileges Administration an
Page 115 and 116:
Remember that the password must be
Page 117 and 118:
9. Technical Notes In this section:
Page 119 and 120:
Making Biolog Universal Growth Agar
Page 121 and 122:
� � � � Technical Notes Gen
Page 123 and 124:
10. Frequently Asked Questions In t
Page 125 and 126:
Q A Q A Q A Frequently Asked Questi
Page 127 and 128:
Troubleshooting Symptom Cause Solut
Page 129 and 130:
Troubleshooting Preparing Inocula S
Page 131 and 132:
Troubleshooting MicroStation Reader
Page 133 and 134:
Glossary Dendrogram Cluster diagram
Page 135 and 136:
Glossary Spore, fungal Sterile, fun
Page 137 and 138:
Culture Media Atmosphere Temperatur
Page 139 and 140:
Appendices: Notes Notes: Section 13
Page 141 and 142:
Appendix 4: Database Species Lists
Page 143 and 144:
Page 145 and 146:
Page 147 and 148:
Page 149 and 150:
Page 151 and 152:
Page 153 and 154:
Page 155 and 156:
Page 157 and 158:
Page 159 and 160:
Page 161 and 162:
Page 163 and 164:
Page 165 and 166:
Page 167 and 168:
Page 169 and 170:
Page 171 and 172:
Page 173 and 174:
Page 175 and 176:
Appendix 5: Program Printouts Appen
Page 177 and 178:
Appendix 5: Program Printouts 1�
Page 179 and 180:
Appendix 5: Program Printouts Funga
Page 181 and 182:
Appendix 5: Program Printouts Print
Page 183 and 184:
Page 185 and 186:
Page 187 and 188:
Appendix 6: Dangerous Pathogens (DP
show all

MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

Create successful ePaper yourself

Delete template?

Save as template?