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MicroStation System, MicroLog Version 4.2 - DTU Systems Biology ...

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Follow<br />

directions<br />

closely to<br />

obtain accurate<br />

results.<br />

Step 1: Isolate a pure culture on Biolog media<br />

<strong>MicroStation</strong> <strong>System</strong>/<strong>MicroLog</strong> Overview<br />

Isolating a pure culture is not always easy. For example: Bacteria often<br />

have sticky surfaces and cells sometimes stick together in clumps. As a<br />

first step to accurate microbe identification, streak agar plates using<br />

correct techniques to generate well isolated colonies. Always use Biologrecommended<br />

culture media and growth conditions. See Section 4 for full<br />

culturing and incubation instructions.<br />

Step 2: Do a Gram stain and determine testing protocol<br />

For bacteria, proper Gram stain technique and interpretation are the<br />

important second step in the ID process. See pages <strong>4.2</strong> and 10.1-10.2. For<br />

FF identification, use the wet prep test as necessary to differentiate yeasts<br />

from filamentous fungi.<br />

Step 3: Prepare inoculum at specified cell density<br />

Microbiologists are sometimes trained to prepare cell suspensions by<br />

judging cell density by eye. This practice will not yield accurate and<br />

reproducible results. Cell density determines oxygen concentration − a key<br />

parameter to control when testing microorganisms in MicroPlates. In<br />

addition, Biolog has carefully optimized the required inoculating fluids.<br />

Don’t deviate from Biolog’s inocula preparation directions See pages 4.7 -<br />

4.10.<br />

Step 4: Inoculate and incubate MicroPlate<br />

Pipet the specified amount of cell suspension into the MicroPlate, put the<br />

lid on, and incubate under the same conditions of temperature and<br />

atmosphere used to culture the microorganism. Biolog MicroPlates do not<br />

need oil overlays or color-developing chemicals.<br />

Step 5: Read MicroPlate and determine ID<br />

After an appropriate incubation time, read MicroPlates either by eye or<br />

using the <strong>MicroStation</strong> Reader. In either case, the pattern formed in the<br />

wells is entered into the software, which searches the database and<br />

provides an identification in seconds.<br />

Easy-to-Use Software<br />

<strong>MicroStation</strong>/<strong>MicroLog</strong> provides an easy-to-follow visual software<br />

interface to lead you through the identification process. The software can<br />

<strong>MicroStation</strong> <strong>System</strong>/<strong>MicroLog</strong> User Guide Nov 07 Section 3 � Page 3

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