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Annual Meeting Proceedings Part 1 - American Society of Clinical ...

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686s Tumor Biology<br />

10622 General Poster Session (Board #52G), Mon, 1:15 PM-5:15 PM<br />

Diurnal proteomics and biomarker discovery in indolent versus aggressive<br />

chronic lymphocytic leukemia patients. Presenting Author: Georg A.<br />

Bjarnason, Sunnybrook Odette Cancer Centre, University <strong>of</strong> Toronto,<br />

Toronto, ON, Canada<br />

Background: In rodents, 10-20% <strong>of</strong> the genome has a 24-hour (h) rhythm in<br />

RNA expression. A molecular clock consisting <strong>of</strong> transcription / translation<br />

feedback loops <strong>of</strong> clock-genes controls this rhythmicity. In a microarray<br />

study (Affymetrix HG_U133_Plus2 chip) on RNA extracted from CLL cells<br />

sampled every 4 hours over 24 hours (6 samples) from 3 male (M) and 6<br />

female (F) patients (pts) with chronic lymphocytic leukemia (CLL) we found<br />

15,094 and 13,415 rhythmic transcripts (Cosinor analysis) in M and F<br />

respectively, only 6,629 <strong>of</strong> which were common to both M and F. We<br />

hypothesized that these gender differences in rhythmic RNA expression<br />

might have clinical implication for biomarker discovery with some important<br />

biomarkers only found at a certain times <strong>of</strong> day and with gender<br />

differences. Methods: Sampling was performed again at 6 time points in M<br />

and F CLL patients with indolent CLL (10pts, 5 M, 5F) and aggressive CLL<br />

(10 pts, 5M, 5F). An 8-plex iTRAQ kit was employed for mass spectrometry<br />

(MS) based relative quantification. Each iTRAQ block comprised all<br />

time-points for a single patient including a universal control. Results: At<br />

least 300 proteins were identified at a 95% confidence level in each iTRAQ<br />

experiment. Of these, 74 proteins displayed significant change between<br />

aggressive and indolent pts in 24-hour average or single time point<br />

normalized expression based on a non-parametric U-test (p�0.05). The<br />

JTK_CYCLE algorithm was used to detect 24-hour rhythmic patterns in the<br />

proteomic datasets. Significant rhythmic expression was found for 44<br />

proteins (p�0.10) identified by iTRAQ. Data for each time point were<br />

independently analyzed using an in-house Butterfly clustering algorithm<br />

based on discrete dynamical systems. The 4 PM time point was found to be<br />

optimal for stratifying aggressive and indolent disease. Cellular pathways<br />

with significant association to differentially expressed proteins included<br />

PPAR signaling, fatty acid metabolism, and granzyme-A signaling. Confirmation<br />

by selected reaction monitoring (SRM) MS is ongoing. Conclusions:<br />

Rhythmic protein expression may have clinical implications for biomarker<br />

discovery.<br />

10624 General Poster Session (Board #53A), Mon, 1:15 PM-5:15 PM<br />

Synthetic lethality <strong>of</strong> EGFR blockade in the context <strong>of</strong> tumor hypoxia.<br />

Presenting Author: Haruhiko Makino, University <strong>of</strong> Texas SouthWestern<br />

Medical Center Department <strong>of</strong> Radiation Oncology, Dallas, TX<br />

Background: Hypoxia induces a wide spectrum <strong>of</strong> biological responses in<br />

tumors that alter tumor radio-sensitivity. In several tumors, including<br />

non-small cell lung carcinoma (NSCLC), the epidermal growth factor<br />

receptor (EGFR) is frequently over-expressed and activated in response to<br />

hypoxia, although the precise role <strong>of</strong> EGFR in hypoxia-associated radioresitance<br />

is unclear. Activating mutations in EGFR have been clinically linked<br />

to dramatic responses to EGFR tyrosine kinase inhibitors. We previously<br />

demonstrated that NSCLCs harboring activating EGFR mutations are<br />

radiosensitive with severe deficits in the non homologous end-joining<br />

(NHEJ) repair <strong>of</strong> DNA damage. Methods: We investigated hypoxia associated<br />

radiation responses in a panel <strong>of</strong> NSCLC cell lines and immortalized<br />

human bronchial epithelial cells expressing wild type EGFR (WT) or<br />

expressed EGFR forms with somatic activating L858R or DE746-E750<br />

mutations (MT). Results: (1) Relative to WT EGFR, MT EGFR expression is<br />

associated with significantly higher radiosensitivity under chronic hypoxia<br />

(2) Under hypoxic conditions, MT EGFR expression is associated with a<br />

unique spectrum <strong>of</strong> DNA damage responses (DDR) that significantly<br />

deviated from canonical response <strong>of</strong> WT EGFR expressing NSCLCs (3)<br />

Genome wide gene expression analysis identified a dramatic hypoxiaassociated<br />

DDR shift to selective down-regulation <strong>of</strong> homologous recombination<br />

(HR). Moreover, MT EGFR deficits in NHEJ caused a synthetic<br />

lethality effect in the context <strong>of</strong> hypoxia through a simultaneous blockade<br />

<strong>of</strong> HR and NHEJ. (4) Blockade <strong>of</strong> WT EGFR by the anti-EGFR monoclonal<br />

antibody, cetuximab perfectly recapitulated the contextual synthetic lethality<br />

<strong>of</strong> MT EGFR expression. (5) Cetuximab had a dramatic synergistic effect<br />

on survival <strong>of</strong> rat lung orthotopic tumors where hypo-fractionated radiotherapy<br />

or cetuximab alone had marginally controlled tumors. Conclusions:<br />

The data support a critical role for EGFR-mediated DNA repair in hypoxia<br />

associated tumor radio-resistance. Furthermore, this role could be a target<br />

for refractory hypoxic EGFR-WT tumor especially in the context <strong>of</strong> hyp<strong>of</strong>ractionated<br />

radiotherapy which, in its current form, is potentially counterproductive<br />

for hypoxic tumors.<br />

10623 General Poster Session (Board #52H), Mon, 1:15 PM-5:15 PM<br />

New mechanistic insights into possible radiobiologic and pathophysiologic<br />

explanations for unexpectedly impressive outcomes data observed for<br />

hormone-refractary metastatic prostate cancer patients treated with radium<br />

223. Presenting Author: Roger M. Macklis, Cleveland Clinic Foundation<br />

and Taussig Cancer Center, Cleveland, OH<br />

Background: The ALSYMPCA Trial <strong>of</strong> 223Ra (“Alpharadin”) for men with<br />

metastatic castrate-resistant prostate cancer was a Phase III randomized<br />

trial comparing 223Ra plus SOC vs best SOC. This trial was stopped early<br />

after 922 patients enrolled at over 100 centers achieved primary (overall<br />

survival) and all secondary endpoints including median survived (14 vs<br />

11.2 m) time to first SRE (13.6 m vs 8.4 m) and time to PSA<br />

progression.These unexpectedly positive results prompted us to review<br />

some <strong>of</strong> the unique aspects <strong>of</strong> alpha-particle radiobiology and ultra-short<br />

range molecular targeting capabilities. Methods: Literature analysis. Results:<br />

The highly energetic alpha particles such as those released during decay <strong>of</strong><br />

223Ra (T1/2 � 11.4 mins) display unique radiobiologic and dosimetric<br />

aspects. The nuclear dose required in vitro for approximately 90% target<br />

cell kill is less than 1 Gy and electron micrographs shortly after exposure<br />

confirm bizarre blebbing and condensation <strong>of</strong> chromosomal material<br />

characteristic <strong>of</strong> apoptosis. Bovine aortic endothelial cells exposed to alpha<br />

particle radiation indicate that the radiobiologic effects depend heavily on<br />

cell culture condition with nonuniform DNA strand break damage observed<br />

in isolated detached cells. The subcellular alpha particle path length<br />

appears to allow specific target cell populations to be killed within bony<br />

stroma without excessive damage to nearby sensitive hematopoietic cells.<br />

223Ra treatment in rodent models showed that this family <strong>of</strong> Ca �� analogs<br />

delivers extremely high doses to stromal elements such as bone-resorbing<br />

osteoclasts and this selectivity may aid in decreasing SREs. Conclusions:<br />

We highlight the fact that some basic radiobiologic and cell compartmentspecific<br />

stromal localization principles known to be effective in alpha<br />

particle radiopharmaceutical therapy may contribute to the very positive<br />

clinical outcomes observed while allowing subcellular damage accumulation<br />

to target cell groups.<br />

10625 General Poster Session (Board #53B), Mon, 1:15 PM-5:15 PM<br />

Using CHFR expression to predict response and survival after first line<br />

treatment with carboplatin-paclitaxel in NSCLC. Presenting Author: Rathi<br />

Narayana Pillai, Winship Cancer Institute, Emory University, Atlanta, GA<br />

Background: The identification <strong>of</strong> resistance mechanisms for conventional<br />

chemotherapy in lung cancer is <strong>of</strong> fundamental importance not only for<br />

personalization <strong>of</strong> chemotherapy but also for the subsequent development<br />

<strong>of</strong> novel targeted approaches to overcome this resistance. Currently, there<br />

is no clinically validated test for the prediction <strong>of</strong> response to tubulintargeted<br />

agents in NSCLC. Our previous preclinical work identified Checkpoint<br />

with Forkhead and Ringfinger domain” (CHFR) as a predictor <strong>of</strong><br />

taxane cytotoxicity in in vitro models. The current work assessed the<br />

translational significance <strong>of</strong> this finding in a cohort <strong>of</strong> US veterans treated<br />

at a single-institution. Methods: We studied a cohort <strong>of</strong> patients with<br />

advanced NSCLC treated with taxane-containing frontline regimens at the<br />

Atlanta VA Medical Center between 2000 and 2009. Archived paraffinembedded<br />

tissue was retrieved and stained for CHFR expression using<br />

standard immunohistochemical techniques. Level <strong>of</strong> protein expression<br />

was assessed by light microscopy and scored for intensity <strong>of</strong> CHFR staining.<br />

Intensity <strong>of</strong> staining was correlated with clinical outcome including<br />

objective response and median overall survival using Chi-Square test and<br />

Cox proportional models. Results: We analyzed tumor samples from 45<br />

eligible patients with median age 62.6 years, M/F (44/1). In this cohort,<br />

high expression <strong>of</strong> CHFR is strongly associated with adverse outcomes: the<br />

risk for progressive disease (PD) after first-line chemotherapy with carboplatin-paclitaxel<br />

was 54% in patients with CHFR-high vs. only 18% in those<br />

with CHFR-low tumors (HR 3.1; 95% CI 1.09-9.04; p�0.02). Median<br />

overall survival was strongly correlated with response to first-line therapy<br />

(clinical benefit: 9.24 months; PD: 4.7 months; p�0.001) and with CHFR<br />

expression status (CHFR low: 10 months; CHFR high: 5.6 months; p<br />

�0.01). Conclusions: CHFR expression is a novel predictive marker <strong>of</strong><br />

response and overall survival in NSCLC patients treated with taxanecontaining<br />

chemotherapy.<br />

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