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Encyclopedia of Evolution.pdf - Online Reading Center

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allele, if crossing over occurred in the portion <strong>of</strong> the chromosome<br />

that is between their respective locations. The breakup<br />

<strong>of</strong> linked traits is called recombination.<br />

Several factors affect linkage between two traits:<br />

• Distance. Crossing over will disrupt the linkage <strong>of</strong> two<br />

traits more <strong>of</strong>ten if they are farther apart from one another<br />

on the chromosome. Two traits that are very close together<br />

may remain linked for a very long time, while two traits<br />

that are far apart will be separated in a few generations.<br />

This general pattern has allowed geneticists to construct<br />

linkage maps, which specify the relative locations <strong>of</strong> genes<br />

on each chromosome.<br />

• Time. Traits distant from one another on a chromosome<br />

are separated after a few generations, while it takes many<br />

generations to separate traits that are closely linked. If<br />

genes for two traits are relatively close together on a chromosome,<br />

the origin <strong>of</strong> the trait may be recent, whereas if<br />

the traits are not linked, their origin may have occurred<br />

further into the past. The same reasoning can be applied to<br />

a trait and noncoding DNA which is close to it (see markers).<br />

Linkage disequilibrium can therefore be used as a<br />

measure <strong>of</strong> the evolutionary age <strong>of</strong> the trait.<br />

• Recombination hotspots. Some parts <strong>of</strong> a chromosome<br />

(hotspots) experience crossing over much more frequently<br />

than others.<br />

Linkage can obscure the study <strong>of</strong> natural selection. Consider<br />

again the linkage between flower color and seed color in<br />

peas. Suppose that natural selection acted upon flower color,<br />

causing white flowers to become more common, and purple<br />

flowers less common, in the pea plant population. The greenseed<br />

color trait would be dragged along with the white flower<br />

color by linkage. An investigator would therefore also discover<br />

that green seeds are becoming more common, and yellow<br />

seeds less common, in the population. The investigator might<br />

assume, erroneously, that natural selection favors green seeds.<br />

Early 20th-century mathematical studies <strong>of</strong> Mendelian<br />

genetics, such as those <strong>of</strong> evolutionary biologist R. A.<br />

Fisher (see Fisher, R. A.), assumed that different genes had<br />

an additive effect: Each contributed separately and equally to<br />

the characteristics <strong>of</strong> an organism. Geneticist Sewall Wright<br />

(see Wright, Sewall) introduced the concept <strong>of</strong> epistasis.<br />

Epistatic genes affect one another’s expression. If a scientist<br />

knows the separate effects <strong>of</strong> two epistatic genes, that scientist<br />

cannot predict the combined effect <strong>of</strong> those genes. Numerous<br />

examples <strong>of</strong> epistasis have been found. One recent study<br />

example found that mutations that had drastically bad effects<br />

on one species <strong>of</strong> fruit fly, Drosophila melanogaster, were the<br />

very same mutations that were found in normal, healthy fruit<br />

flies <strong>of</strong> another species, D. pseudoobscura. The researchers<br />

explained that epistatic genes allowed D. pseudoobscura to<br />

compensate for the negative effect <strong>of</strong> the mutation. They also<br />

found that about 10 percent <strong>of</strong> the mutations that are lethal<br />

in D. melanogaster are present in wild flies and mosquitoes.<br />

Similarly, about 10 percent <strong>of</strong> mutations that are lethal in<br />

humans are present in some other mammal wild type. Epistasis<br />

has been found in different strains <strong>of</strong> HIV (see AIDS,<br />

evolution <strong>of</strong>).<br />

Mendelian Genetics Affects Humans<br />

Now that the Mendelian basis <strong>of</strong> inheritance is known, it is<br />

common for people to think <strong>of</strong> genes as determining the fates<br />

<strong>of</strong> individuals. Modern biologists consider this view, called<br />

genetic determinism, to be incorrect, especially for characteristics<br />

such as intelligence which are strongly influenced by the<br />

environment and actions <strong>of</strong> the individual. Even some genetic<br />

disorders can <strong>of</strong>ten be treated by environmental therapy and<br />

are therefore not genetically determined. Children with PKU<br />

(phenylketonuria) may die if they eat food that contains significant<br />

amounts <strong>of</strong> the amino acid phenylalanine; they cannot<br />

metabolize this amino acid, and it instead becomes a toxic<br />

side product that poisons the brain. The solution is simple: The<br />

children should not eat food that has phenylalanine. Hemophilia<br />

results from the inability to make a certain blood clotting<br />

protein. Hemophiliacs can now inject the clotting protein into<br />

their blood, entirely compensating for their missing protein.<br />

Now hemophiliac men not only survive but can even have children,<br />

with the result that the number <strong>of</strong> hemophiliac women<br />

is now increasing. Some other mutations, such as fragile X<br />

syndrome (in which the X chromosome breaks) or the allele<br />

that causes cystic fibrosis, are much harder to overcome. The<br />

mucus buildup that accompanies cystic fibrosis causes respiratory<br />

infections. This is treated by laboriously removing and<br />

attempting to reduce the mucus buildup and continually battling<br />

the infections. The Human Genome Project has, as one<br />

<strong>of</strong> its main objectives, the identification <strong>of</strong> all human genes,<br />

therefore <strong>of</strong> all genetic disorders, so that the defective or missing<br />

protein can be identified and perhaps replaced.<br />

Mendelian genetics has therefore allowed scientists to<br />

understand the process <strong>of</strong> evolution and has in many cases<br />

given them the tools to bring genetic disorders and defects<br />

under control, thus benefiting the lives <strong>of</strong> many individuals.<br />

Further <strong>Reading</strong><br />

Bonhoeffer, Sebastian, et al. “Evidence for positive epistasis in HIV-<br />

1.” Science 306 (2004): 1,547–1,550. Summarized by Michalakis,<br />

Yannis, and Dennis Roze, Science 306 (2004): 1,492–1,493.<br />

Gould, Stephen Jay. “Fleeming Jenkin revisited.” Chap. 23 in Bully<br />

for Brontosaurus. New York: Norton, 1991.<br />

Kulathinal, Rob J., Brian R. Bettencourt, and Daniel L. Hartl. “Compensated<br />

deleterious mutations in insect genomes.” Science 306<br />

(2004): 1,553–1,554.<br />

Mesolithic See technology.<br />

Mesozoic era<br />

Mesozoic era The Mesozoic era (the era <strong>of</strong> “middle life”)<br />

is the second era <strong>of</strong> the Phanerozoic Eon, or period <strong>of</strong> visible<br />

multicellular life, which followed the Precambrian time in<br />

Earth history (see geological time scale). The Mesozoic<br />

era began with the mass extinction event that occurred at<br />

the end <strong>of</strong> the Permian period <strong>of</strong> the Paleozoic era (see<br />

mass extinctions; Permian extinction). The Mesozoic era<br />

consists <strong>of</strong> three geological periods, the Triassic period, the<br />

Jurassic period, and the Cretaceous period.<br />

The single great continent <strong>of</strong> Pangaea broke apart during<br />

the Mesozoic era, to form two groups <strong>of</strong> continents, one <strong>of</strong><br />

which would later become North America and Eurasia, the

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