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Introduction to the Agilent 7100 Capillary Electrophoresis System

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Using <strong>the</strong> <strong>Agilent</strong> <strong>7100</strong> <strong>Capillary</strong> <strong>Electrophoresis</strong> <strong>System</strong> 5<br />

<strong>Capillary</strong> <strong>Electrophoresis</strong>, CE<br />

Detec<strong>to</strong>r Parameters<br />

The parameters for <strong>the</strong> detec<strong>to</strong>r are set in <strong>the</strong> DAD tab of <strong>the</strong> Method Setup<br />

dialog used in <strong>the</strong> <strong>Agilent</strong> ChemStation (see Figure 20 on page 93). On <strong>the</strong> left<br />

hand-side you can define <strong>the</strong> following settings:<br />

• Used signals, detection and reference wavelengths, bandwidths<br />

• Peak width or detec<strong>to</strong>r response time<br />

• Detec<strong>to</strong>r s<strong>to</strong>ptime and posttime<br />

Signals, Wavelengths and Bandwidths<br />

Detec<strong>to</strong>r parameters allow you <strong>to</strong> define <strong>the</strong> detec<strong>to</strong>r signals you want <strong>to</strong><br />

acquire during <strong>the</strong> analysis and s<strong>to</strong>re in <strong>the</strong> data file. For each signal <strong>the</strong><br />

wavelengths and bandwidths of sample and reference wavelengths are<br />

defined.<br />

It is recommended <strong>to</strong> do runs without using reference wavelengths <strong>to</strong><br />

minimize baseline noise. Reference wavelengths can help <strong>to</strong> compensate for<br />

signal drifts. As reference wavelengths are usually measured at higher<br />

wavelengths, <strong>the</strong> baseline noise is increased when using reference<br />

wavelengths. Therefore, it might be appropriate <strong>to</strong> record <strong>the</strong> two signals at<br />

<strong>the</strong> same wavelength; one using <strong>the</strong> reference wavelength and one without.<br />

The signal you want <strong>to</strong> s<strong>to</strong>re in <strong>the</strong> data file is displayed below <strong>the</strong> lamp icon of<br />

<strong>the</strong> DAD tab of <strong>the</strong> instrument diagram.<br />

Peak Width<br />

The peak width sets <strong>the</strong> optimum response time of your detec<strong>to</strong>r. If you have<br />

similar peak widths in your electropherogram, set it <strong>to</strong> <strong>the</strong> width of one of <strong>the</strong><br />

peaks in your electropherogram. If <strong>the</strong> peak widths are very different you can<br />

use <strong>the</strong> detec<strong>to</strong>r timetable <strong>to</strong> adjust <strong>the</strong> peak width setting during <strong>the</strong> analysis.<br />

If your peak width setting is <strong>to</strong>o narrow, peaks might be not detected<br />

au<strong>to</strong>matically. This will lead <strong>to</strong> no spectra for <strong>the</strong> wider peaks being acquired<br />

and in case of peak dependent detection.<br />

<strong>Agilent</strong> <strong>7100</strong> <strong>Capillary</strong> <strong>Electrophoresis</strong> <strong>System</strong> User Manual 107

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