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Applied Biosystems 7900HT Fast Real-Time PCR System and SDS ...

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After the RunAfter the RunUser AccessRequirementEjecting a Plate(Opening <strong>and</strong>Closing theInstrument Tray)If using the <strong>SDS</strong> Enterprise Database, you must belong to the Scientist orAdministrator User Group to save a plate document.View the instrument status icon to determine the plate document to use to eject the plate.Instrument StatusConnected toplatenameAction1. In the <strong>SDS</strong> software, select Window >(the plate documentconnected to the instrument).2. In the plate document, select the Instrument tab3. Select the Plate-Read or <strong>Real</strong>-<strong>Time</strong> tab.4. Click .Disconnected1. In the <strong>SDS</strong> software, click (or select File > New).2. Click .3. Select the Instrument tab.4. Select the Plate-Read or <strong>Real</strong>-<strong>Time</strong> tab.5. Click .Saving theRun DataAfter the run, you must either save the results to the <strong>SDS</strong> Enterprise Database or savethe run data to the <strong>SDS</strong> <strong>7900HT</strong> Document (*.sds).To save the run data to the <strong>SDS</strong> <strong>7900HT</strong> Document:1. In the <strong>SDS</strong> software, select File > Save.To save the run data to the <strong>SDS</strong> Enterprise Database:IMPORTANT! If you saved the plate document to the database prior to running theplate, the <strong>SDS</strong> software stored the run data as a temporary file in the /temp directory. Ifyou closed your plate document at the end of the run without saving it, open the tempdirectory <strong>and</strong> rename the temporary file to *.sds <strong>and</strong> you will be able to open the file.1. Select File > Save Document to Database:2. In the Comment field of the Save Document to Database dialog box, enter abrief description of the plate document (up to 255-characters).Note: If saving a plate document file to the database, you will loose the filename unless you enter it into the Comments field.3. Click .4. In the Saved Document dialog box, click .Analyzing theRun DataSection 5.1 Allelic Discrimination . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-5Section 6.1 Absolute Quantification . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-5Section 6.2 Relative Quantification . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-15Section 6.3 Dissociation Curve Analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-37<strong>Applied</strong> <strong>Biosystems</strong> <strong>7900HT</strong> <strong>Fast</strong> <strong>Real</strong>-<strong>Time</strong> <strong>PCR</strong> <strong>System</strong> <strong>and</strong> <strong>SDS</strong> Enterprise Database User Guide 4-29DRAFTSeptember 1, 2004 11:39 am, CH_Basic.fm

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