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iCys User Guide

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May 6, 2005 Administrator Tasks<br />

Defining Custom Carriers<br />

CompuCyte now allows you to define custom carriers for your <strong>iCys</strong> system. Every<br />

carrier type has a unique name and ID number.<br />

You can define a custom carrier by either copying an existing carrier type or by<br />

defining an entirely new carrier type. Either way, the new custom carrier is given a<br />

unique ID.<br />

Tip: Before you define a new custom carrier, try to obtain the dimensions of<br />

your carrier from the supplier or from the manufacturer’s website. Having<br />

the exact dimensions will greatly simplify the definition process.<br />

➣ To define a custom carrier from the Carrier Types list:<br />

❑ Select a similar carrier and click Copy. When you follow the directions in<br />

“Defining a Microplate Carrier” on page C-7 or “Defining a Freeform Carrier” on<br />

page C-16, keep in mind that you will be changing existing parameters rather than<br />

entering new parameters.<br />

CompuCyte recommends that, whenever possible, you copy and rename a similar<br />

existing carrier.<br />

❑ Click New. In this case, follow the directions in “Defining a Microplate Carrier”<br />

on page C-7 or “Defining a Freeform Carrier” on page C-16.<br />

Defining a Microplate Carrier<br />

A microplate carrier contains a specified number of wells, each of which is identical.<br />

When generating a microplate scan, <strong>iCys</strong> assumes that the scan areas are identical for<br />

every well.<br />

Note: When defining a custom plate, the plate map (that displays when you<br />

click Carrier), may not be a precise representation of the plate. The plate<br />

wells will always appear to start in the same location in the upper left<br />

corner of the plate map. However, the distances between wells and other<br />

criteria should display correctly.<br />

Revision B <strong>iCys</strong> Research Imaging Cytometer <strong>User</strong> <strong>Guide</strong> C-7

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