iCys User Guide

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Administrator Tasks Defining Custom Carriers Defining a Freeform Carrier Rather than consisting of uniform wells, a freeform carrier can contain one or more carrier display areas, which do not have to be identical (but usually are). ➣ To define a new freeform carrier: 1. From the Manage Carrier Types window, select New. The Edit Carrier Type window displays: 2. In the General tab, set the following: ❍ Type—Freeform Carrier. To define a microplate carrier, see “Defining a Microplate Carrier” on page C-7. ❍ Name—Enter a meaningful name for this carrier type. Keep in mind that your users will select this carrier type using the name specified here. ❍ Description—Optional, but useful. ❍ Visibility—Select Hidden if you want to make this carrier type unavailable from the Instrument Setup window. The visibility can be overwritten by the Hide/UnHide button on the Carrier Types list. 3. rTo view the carrier while you are defining it, click Carrier from the task bar. When you click Save on the Edit Carrier Type window, the Carrier window updates to reflect the changes. 4. Before you start describing the dimensions, make sure that the microscope objective selected in the current Workspace matches the objective you are using. C-16 iCys Research Imaging Cytometer User Guide Revision B
May 6, 2005 Administrator Tasks The objective is set in the General tab of the Instrument Setup window and listed in the task bar. 5. Open the XY tab to set the XY parameters. 6. In the Rooms section, select New. Room R1 will be created and the XY tab displays the parameters for that room: 7. In the XY tab, you can set the following general parameters: ❍ Dimension—The dimensions of the display area. In general, CompuCyte suggests that you do not make changes to the Dimension values, and display the entire carrier. ✧ X Width—The width of the display area, in millimeters. ✧ Y Length—The length of the display area, in millimeters. Note: If you specify the carrier display area (or copy a carrier that specifies the display area), keep in mind that the display area must be smaller than the standard carrier size, which is 127.76mm x 85.48mm. Additionally, when specifying room locations, all rooms must reside within the display area. ❍ Top Right Carrier Corner—The distance between the outside edge of the carrier and the edge of the top right carrier display area. CompuCyte suggests that you set both the X and Y value to 0. Revision B iCys Research Imaging Cytometer User Guide C-17
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Contents Chapter 1 Introduction Man
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May 6, 2005 Contents iCys Status Ba
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May 6, 2005 Contents Appendix B Usi
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Chapter 1 Introduction This manual
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Chapter 2 iCys Research Imaging Cyt
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Chapter 3 iCys Cytometric Analysis
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Appendix A Installing iCys Research
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Appendix B Using the iNovator Toolk
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