Evolution__3rd_Edition

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.. (a) (b) (c) Gave de Pau Gave d’Ossau Aragon Gallego Ara Adour CHAPTER 13 / Species Concepts and Intraspecific Variation 371 Neste D’Aure Cinca Garonne Esera Salat Ribagorzana Flamisell Valira Noguera Palleresa Ariège Segre 20 km Yellow Pink Color 80 100 140 130 Ipo-1 Aude
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.. EVOLUTION
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© 2004 by Blackwell Science Ltd a
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vi Brief Contents PART 5. MACROEVOL
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viii Full Contents 3.5 Ring “spec
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x Full Contents 7.2 Rates of molecu
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xii Full Contents 10.5 Genetics of
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xiv Full Contents PART 4. EVOLUTION
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xvi Full Contents 14.12 Identificat
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xviii Full Contents 17.7 Geographic
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xx Full Contents 21.4.3 Ordovician
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Preface The theory of evolution is
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xxiv Preface evolve resistance to d
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.. Introduction Part one When Darwi
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4 PART 1 / Introduction Evolution i
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6 PART 1 / Introduction Examples ex
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8 PART 1 / Introduction Time (a) (b
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10 PART 1 / Introduction . . . look
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12 PART 1 / Introduction Time (a) (
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14 PART 1 / Introduction Figure 1.7
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18 PART 1 / Introduction . . . and
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20 PART 1 / Introduction Further re
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22 PART 1 / Introduction DNA is car
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24 PART 1 / Introduction Most genes
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26 PART 1 / Introduction Table 2.1
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28 PART 1 / Introduction Original D
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30 PART 1 / Introduction (a) Transp
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32 PART 1 / Introduction . . . per
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34 PART 1 / Introduction Dominance
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Figure 2.11 Two populations with 10
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42 PART 1 / Introduction Study and
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44 PART 1 / Introduction Life could
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48 PART 1 / Introduction Tooth qual
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50 PART 1 / Introduction Artificial
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52 PART 1 / Introduction Ring speci
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54 PART 1 / Introduction Human obse
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58 PART 1 / Introduction 5' pG Anti
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62 PART 1 / Introduction (a) α-hem
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64 PART 1 / Introduction Age (Myr a
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66 PART 1 / Introduction The groups
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68 PART 1 / Introduction The scient
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70 PART 1 / Introduction Study and
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Plate 3 Here in the lower row are s
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Plate 6 Scrub jays (Aphelocoma coer
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Plate 8 Chromosomal races of the ho
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Plate 10 Geological map of North Am
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72 PART 1 / Introduction Cod produc
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74 PART 1 / Introduction The strugg
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76 PART 1 / Introduction Many chara
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82 PART 1 / Introduction Chromosome
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86 PART 1 / Introduction The condit
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90 PART 1 / Introduction Summary 1
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.. Evolutionary Genetics Part two T
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.. 5 The Theory of Natural Selectio
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.. Figure 5.1 The general model of
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.. . . . and use Mendel’s rules t
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.. A simpler proof of the Hardy- We
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.. The MN human blood group system
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.. CHAPTER 5 / The Theory of Natura
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.. We need to know more to understa
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.. Figure 5.4 Peppered moths natura
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.. Mark-recapture experiments sugge
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.. Manchester The fitness estimates
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.. Pests, such as mosquitoes, evolv
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.. Figure 5.8 The mortality of mosq
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.. Box 5.2 Resistance Management Th
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.. Other factors will be at work in
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.. . . . which can sometimes be use
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.. Figure 5.9 The global incidence
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.. In host-parasite relations, the
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.. Populations may be subdivided CH
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.. We construct a model of gene fre
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.. We construct a model of selectio
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.. Further reading CHAPTER 5 / The
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.. 6 Random Events in Population Ge
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.. Box 6.1 Random Sampling in Genet
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.. Probability of polymorphism 1.0
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.. Evolution can occur by random dr
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.. Random drift has consequences fo
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.. Generation 1 Generation2 Adults
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.. CHAPTER 6 / Random Events in Pop
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.. Heterozygosity ( H ) 1.0 0.9 0.8
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.. Summary 1 In a small population,
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.. 7 Natural Selection and Random D
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.. Two extreme views b selectionist
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.. The original neutral theory has
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.. . . . and levels of polymorphism
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.. homozygotes by normal Mendelian
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.. Amino acid differences 1.0 0.9 0
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.. Globin evolution in “living fo
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.. Long-generation species, e.g., w
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.. Observed heterozygosity 1.0 0.8
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.. The nearly neutral theory can ex
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.. Insulin illustrates the effect o
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.. CHAPTER 7 / Natural Selection an
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.. Biologists came to accept, throu
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.. Elevated dN/dS ratios are observ
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.. Box 7.4 Model Organisms for Biom
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.. But the test has proved illumina
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.. Evidence shows that synonymous c
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.. The genomic era is allowing new
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.. Summary 1 The neutral theory of
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.. Study and review questions 1 Dra
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.. The tiger swallowtail butterfly
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.. Mimicry requires the correct com
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.. A haplotype is a haploid combina
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.. Linkage disequilibrium ( D) r =
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.. The more complex multilocus mode
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.. Expected frequency ( piqi ) (a)
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.. A model of haplotype frequency c
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.. Evidence for linkage disequilibr
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.. (proportion of polymorphic sites
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.. CHAPTER 8 / Two-locus and Multil
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.. Adaptive topographies can be use
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.. Mean population fitness ( w ) -
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.. p' 0 1 0 Frequency of A allele S
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.. Study and review questions 1 Her
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.. Beak size influences feeding eff
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.. Population size Seed √depth ×
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.. Continuous characters are influe
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.. Genetic and environmental influe
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.. Several non-additive genetic fac
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.. Box 9.1 Some Statistical Terms U
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.. Parent-offspring similarity depe
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.. Frequency Frequency Generation 1
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.. New variation can be introduced
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.. (a) 1976-1977 (b) 1981-1982 (c)
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.. Figure 9.11 (a) The main veins i
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.. Certain non-linear relations can
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.. Behavior Physiology Life history
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.. Some heritable characters do not
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.. Further reading CHAPTER 9 / Quan
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.. Adaptation and Natural Selection
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.. 10Adaptive Explanation T his cha
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.. . . . factually, ... . . . or th
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.. Not all evolution is adaptive CH
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.. Figure 10.2 Stages in the evolut
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.. Some critics suggest that the in
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.. Box 10.1 Molecular Cooption The
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.. Fitness (a) (b) Small mutation L
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.. Figure 10.5 A cross between the
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.. . . . by experiment, ... . . . a
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.. Figure 10.6 The fruits of (a) Cr
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.. Heterozygous advantage may lead
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.. Figure 10.7 Developmental asymme
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.. . . . that can be tested between
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.. Fitness (a) Time 1 (b) Time 2 (c
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.. Fitness Fitness (a) Time 1 (c) T
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.. Imperfect adaptations may or may
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.. The “design” of an eye for s
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.. hypothesis of adaptation or cons
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.. Study and review questions 1 Wha
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.. An adaptation may benefit one le
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.. The sd gene gains an advantage f
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.. CHAPTER 11 / The Units of Select
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.. We define Hamilton’s rule Hami
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.. Kin selection is at work in this
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.. Selfish The theories of group se
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.. Box 11.1 Group Selection for Egg
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.. The unit of selection, in a seco
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.. * * The word “gene” is being
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.. Summary 1 Adaptations evolve by
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.. in Sexual Reproduction 12Adaptat
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.. Figure 12.2 Non-reproductive sex
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.. Figure 12.3 Evolution in (a) ase
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.. Asexual reproduction has a spind
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.. . . . as illustrated by a motor
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.. Log fitness of organisms Number
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.. Figure 12.7 Frequency changes of
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.. Genetic cycles in snails are con
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.. Darwin provided comparative evid
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.. . . . which may explain extreme
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.. Theory requires open-ended choic
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.. But selection may have removed h
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.. Courtship bouts Net reproductive
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.. Theory predicts deviations from
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.. CHAPTER 12 / Adaptations in Sexu
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.. Study and review questions 1 Wha
Page 760: 346 PART 4 / Evolution and Diversit
Page 814: .. Ecological factors can influence
Page 818: .. Biological species are real, not
Page 822: .. Biologists disagree about how re
Page 826: .. CHAPTER 13 / Species Concepts an
Page 830: .. 14Speciation S peciation means t
Page 834: .. (a) Space (b) (c) Time Geographi
Page 838: .. Figure 14.2 Prezygotic isolation
Page 842: .. Figure 14.3 Song form may be ple
Page 846: .. Could postzygotic isolation evol
Page 850: .. Hybrid fitness is influenced by
Page 854: .. Diploid genotype Gene duplicatio
Page 858: .. . . . in exceptional conditions
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.. Fitness of hybrid offspring Fitn
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.. Speciation often occurs as a byp
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.. The theory of reinforcement has
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.. Less interbreeding between speci
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.. . . . but also open to alternati
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.. Figure 14.11 Hybrid speciation b
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.. Reinforcement works in sympatry
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.. Most hybrid zones are due to sec
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.. Phylogenetic tests for sympatric
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.. This is a “hot topic” The Od
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.. Biologists are interested in the
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.. Summary 1 The evolution of a new
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.. CHAPTER 14 / Speciation 421 On r
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.. Reconstruction of Phylogeny 15Th
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.. Shared characters are used to in
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.. Figure 15.2 Character conflict i
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.. Figure 15.4 Convergence in marsu
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.. We distinguish ancestral from de
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.. Figure 15.7 Shared characters di
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.. Parsimony underlies outgroup com
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.. Protein and DNA sequences have b
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.. Molecular phylogenetics uses sta
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.. Figure 15.11 Distance methods. (
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.. Percentage difference in DNA of
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.. When two species are very differ
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.. Figure 15.15 The same character
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.. Variable evolutionary rates upse
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.. Ribosomal RNA genes are widely u
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.. The number of possible trees can
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.. . . . as happened in one study o
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.. Evolutionary time Species 1 Orth
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.. The root of a tree ... . . . can
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.. Figure 15.24 The rooted angiospe
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.. The fossil characters were reint
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.. Figure 15.27 Phylogeny of 103 sp
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.. Summary 1 Phylogenies show the a
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.. Study and review questions 1 Her
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.. 16Classification and Evolution B
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.. Phenetic classification is nonev
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.. CHAPTER 16 / Classification and
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.. (a) Phenetic measurements for fi
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.. Distance can be measured in more
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.. Cladism admits only monophyletic
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.. Phylogenetic classification face
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.. Evolutionary classification admi
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.. Classification 1 Classification
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.. Other factors are probably at wo
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.. Study and review questions 1 Mat
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.. Figure 17.1 The natural distribu
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.. Figure 17.2 (a) The six main fau
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.. Dispersal is enabled by various
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.. Many species show similar geneti
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.. Figure 17.4 (b) The three major
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.. Fruitflies and lizards show a co
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.. Plate tectonics causes vicarianc
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.. Time Biogeographic distribution
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.. Figure 17.11 Testing vicariance
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.. (b) Five other vertebrate groups
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.. . . . and South American mammals
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.. CHAPTER 17 / Evolutionary Biogeo
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.. The Great American Interchange i
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.. CHAPTER 17 / Evolutionary Biogeo
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.. Macroevolution Part five Part 5
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.. 18The History of Life T his chap
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.. Geological maps show the locatio
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.. CHAPTER 18 / The History of Life
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.. Time (Myr BP) 0.5 1.0 2.0 3.0 4.
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.. Figure 18.3 Around 2-3 billion y
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.. . . . partly by symbiosis Atmosp
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536 PART 5 / Macroevolution Protost
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538 PART 5 / Macroevolution Plants
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540 PART 5 / Macroevolution Some ma
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542 PART 5 / Macroevolution The amn
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544 PART 5 / Macroevolution Figure
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546 PART 5 / Macroevolution Changes
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548 PART 5 / Macroevolution Myr ago
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550 PART 5 / Macroevolution Genetic
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554 PART 5 / Macroevolution Further
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19Evolutionary Genomics T he comple
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558 PART 5 / Macroevolution Some hu
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560 PART 5 / Macroevolution Molecul
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562 PART 5 / Macroevolution Superfl
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564 PART 5 / Macroevolution (a) Gen
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568 PART 5 / Macroevolution Transpo
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570 PART 5 / Macroevolution Summary
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Developmental Biology 20Evolutionar
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580 PART 5 / Macroevolution The Hox
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582 PART 5 / Macroevolution The num
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584 PART 5 / Macroevolution Mouse C
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586 PART 5 / Macroevolution A gene
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21Rates of Evolution E volutionary
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592 PART 5 / Macroevolution Time (M
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594 PART 5 / Macroevolution Table 2
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596 PART 5 / Macroevolution . . . a
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598 PART 5 / Macroevolution (a) 5 B
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602 PART 5 / Macroevolution Apparen
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606 PART 5 / Macroevolution Discret
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612 PART 5 / Macroevolution Further
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616 PART 5 / Macroevolution Full ev
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620 PART 5 / Macroevolution . . . o
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622 PART 5 / Macroevolution One stu
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624 PART 5 / Macroevolution Box 22.
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626 PART 5 / Macroevolution Table 2
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628 PART 5 / Macroevolution Nematod
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630 PART 5 / Macroevolution The cop
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634 PART 5 / Macroevolution Carnivo
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638 PART 5 / Macroevolution Number
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640 PART 5 / Macroevolution Coevolu
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642 PART 5 / Macroevolution Study a
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644 PART 5 / Macroevolution Adaptiv
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646 PART 5 / Macroevolution Extinct
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648 PART 5 / Macroevolution . . . b
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Tertiary Lower Danian Cretaceous Up
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652 PART 5 / Macroevolution The ast
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654 PART 5 / Macroevolution 10 6 ye
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656 PART 5 / Macroevolution Extinct
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658 PART 5 / Macroevolution Darwin
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660 PART 5 / Macroevolution (a) Ext
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664 PART 5 / Macroevolution Hansen
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666 PART 5 / Macroevolution Taxa wi
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668 PART 5 / Macroevolution Fossil
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670 PART 5 / Macroevolution One gro
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672 PART 5 / Macroevolution Molecul
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674 PART 5 / Macroevolution Changes
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676 PART 5 / Macroevolution . . . o
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680 PART 5 / Macroevolution (2002),
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Glossary Words in italics cross-ref
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684 Glossary individuals, such as p
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686 Glossary isolating mechanism An
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688 Glossary random drift Synonym o
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Answers to Study and Review Questio
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692 Answers to Study and Review Que
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700 References Arnold, M.L. (1997).
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702 References Briggs, D.E.G. & Cro
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704 References Clarke, C.A., Sheppa
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706 References Dietl, G.P., Alexand
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708 References Flynn, J.J. & Wyss,
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710 References Grant, P.R. & Grant,
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712 References Hey, J. (2001). Gene
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714 References Jeffreys, A.J., Royl
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716 References Kruuk, L.E.B., Meril
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718 References MacFadden, B.J. (199
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720 References Milinkovitch, M.C.,
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722 References Orr, H.A. (1998). Th
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724 References Rice, W.R. (2002). E
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726 References Sequeira, A.S., Lant
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728 References Surlyk, F. & Johanse
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730 References Vrba, E.S. (1993). T
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732 References Wright, S. (1977). E
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734 Index angiosperms (cont.): inse
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736 Index coloration (cont.): prezy
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738 Index evolution (cont.): long-t
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740 Index genetics (cont.): charact
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742 Index immunoglobulins 24 immuno
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744 Index molecular distance 440-2
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746 Index parasites (cont.): genome
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748 Index reproductive development
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750 Index synonymous changes (cont.
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