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12th International Conference on Harmful Algae

12th International Conference on Harmful Algae

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INTERNATIONAL SOCIETY FOR THE STUDY OF HARMFUL ALGAE12 th <str<strong>on</strong>g>Internati<strong>on</strong>al</str<strong>on</strong>g> <str<strong>on</strong>g>C<strong>on</strong>ference</str<strong>on</strong>g> <strong>on</strong> <strong>Harmful</strong> <strong>Algae</strong>, Copenhagen, Denmark, 4-8 September 2006brevetoxin accumulati<strong>on</strong> in fish ismuch more comm<strong>on</strong> than initiallyexpected. More than 70% of the fishanalyzed were found to c<strong>on</strong>taindetectable levels of brevetoxins intheir tissues. Prevalence, toxinlevels and distributi<strong>on</strong> in tissuesfrom fish at all positi<strong>on</strong>s in the foodwebare discussed with regards tohuman and natural resourceshealth.1 Flewelling, Naar et al. Nature 2005435:755-756PO.15-11Rapid detecti<strong>on</strong> of toxicAlexandrium species by Loopmediatedisothermalamplificati<strong>on</strong>, a new DNAamplificati<strong>on</strong> methodSessi<strong>on</strong>: PO.15 – M<strong>on</strong>itoringSatoshi Nagai, Y Matsuyama, S ItakuraFisheries Research Agency of Japan,HIROSHIMA, JapanIn order to detect toxic Alexandriumspecies, we designed andevaluated a novel DNA amplificati<strong>on</strong>method using Loop-mediatedisothermal amplificati<strong>on</strong> (LAMP).This method synthesizes a largeamount of DNA with high specificity,sensitivity, and rapidity underisothermal c<strong>on</strong>diti<strong>on</strong>s at 60-65 °C,and it is unnecessary to useexpensive equipments (thermalcycler and Q-PCR system). Themethod employs a DNA polymerasewith strand displacement activityand a set of four specially designedprimers that recognize a total of sixdistinct sequences <strong>on</strong> the targetDNA. This method can bem<strong>on</strong>itored the target DNA in realtimeby increase in turbidity due toan abundance of the by-product,pyrophosphate, and also detectedthe DNA in the presence offluorescent intercalating dye withthe naked eye. The primerstargeting the D1/D2 regi<strong>on</strong> of thelarge-subunit rDNA were designedin each species. LAMP was carriedout in a reacti<strong>on</strong> mixture c<strong>on</strong>tainingBst DNA polymerase and itsappended buffer, dNTPs, andbetaines to screen for specificity,rapidity and simplicity i.e. primercombinati<strong>on</strong> and DNA extracti<strong>on</strong>,etc. The LAMP method is a simplemethod which can detect the DNAof target species from a single cellin natural samples within 20-25 minwith high specificity (

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