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ABI Prism® 7900HT Sequence Detection System ... - OpenWetWare

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Significance of<br />

Threshold Cycles<br />

Beginning with the equation describing the exponential amplification of the PCR:<br />

Xn = Xm( 1+ EX) where:<br />

n m –<br />

Xn = number of target molecules at cycle n (so that n ≥ m)<br />

Xm = number of target molecules at cycle m (so that m ″ n)<br />

EX = efficiency of target amplification (between 0–1)<br />

n - m = number of cycles elapsed between cycle m and cycle n<br />

Amplicons designed and optimized according to Applied Biosystems guidelines<br />

(amplicon size

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