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ABI Prism® 7900HT Sequence Detection System ... - OpenWetWare

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Stopping the<br />

<strong>Sequence</strong> Detector<br />

from the<br />

SDS Software<br />

4-26 Run Setup and Basic Operation<br />

IMPORTANT Read the following directions carefully before stopping a run-in-progress.<br />

Run Type Action<br />

End-Point Runs From the Plate-Read tab of the plate document, click Stop.<br />

♦ Allelic<br />

Discrimination<br />

Real-Time Runs<br />

♦ Absolute<br />

Quantification<br />

♦ Melting Curve<br />

Has the Cover reading in the Real-Time tab reached 104 °C?<br />

♦ NO (the heated cover temperature is below 104 °C)<br />

From the Real-Time tab of the plate document, click Stop.<br />

♦ YES (the heated cover temperature has reached 104 °C)<br />

The instrument has begun to run the plate and is in the process of<br />

thermal cycling. Determine a course of action from the options in<br />

the following table:<br />

Reason for Stopping the Run Then…<br />

Forgot to make a change to the plate<br />

document such as adding a detector,<br />

detector task, or sample name<br />

(not including mistakes to the<br />

temperature profile)<br />

♦ Forgot to add a reagent to the plate<br />

(suchasenzymeormastermix)<br />

♦ Programmed the plate document<br />

with the wrong thermal profile<br />

do not stop the run.<br />

Allow the instrument complete the run, then edit<br />

the plate document before analyzing the data.<br />

The software does not use detector or sample<br />

information until the plate document is analyzed.<br />

a. From the Real-Time tab of the plate<br />

document, click Stop.<br />

b. Determinehowfarintotheruntheinstrument<br />

has progressed.<br />

c. Based on the state of the run, determine<br />

whether the plate can be re-run.<br />

d. If necessary, eject the plate and add the<br />

missing reaction component.<br />

e. If desired, re-run the plate by re-creating the<br />

plate document.

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