Ergebnisbericht 2010/11 - Helmholtz-Zentrum für Infektionsforschung
Ergebnisbericht 2010/11 - Helmholtz-Zentrum für Infektionsforschung
Ergebnisbericht 2010/11 - Helmholtz-Zentrum für Infektionsforschung
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156 WISSENSCHAFTLICHER ERGEBNISBERICHT | Veröffentlichungen<br />
• Kiss,H., Lang,E., Lapidus,A., Copeland,A., Nolan,M., Glavina<br />
Del,R.T., Chen,F., Lucas,S., Tice,H., Cheng,J.F., Han,C., Goodwin,L.,<br />
Pitluck,S., Liolios,K., Pati,A., Ivanova,N., Mavromatis,K., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Detter,J.C., Brettin,T., Spring,S., Rohde,M., Göker,M., Woyke,T.,<br />
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C.,<br />
& Klenk,H.P. (<strong>2010</strong>) Complete genome sequence of Denitrovibrio<br />
acetiphilus type strain (N2460). Standards in Genomic Sciences 2,<br />
270-279.<br />
• Kotz,A., Wagener,J., Engel,J., Routier,F., Echtenacher,B., Pich,A.,<br />
Rohde,M., Hoffmann,P., Heesemann,J., & Ebel,F. (<strong>2010</strong>) The mitA<br />
gene of Aspergillus fumigatus is required for mannosylation of inositol-phosphorylceramide,<br />
but is dispensable for pathogenicity. Fungal<br />
Genetics and Biology 47, 169-178.<br />
• Labutti,K., Sikorski,J., Schneider,S., Nolan,M., Lucas,S., Glavina<br />
Del,R.T., Tice,H., Cheng,J.F., Goodwin,L., Pitluck,S., Liolios,K.,<br />
Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Tindall,B.J., Rohde,M., Göker,M., Woyke,T., Bristow,J., Eisen,J.A.,<br />
Markowitz,V., Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., & Lapidus,A.<br />
(<strong>2010</strong>) Complete genome sequence of Planctomyces limnophilus type<br />
strain (Mu 290). Standards in Genomic Sciences 3, 47-56.<br />
• Labutti,K., Mayilraj,S., Clum,A., Lucas,S., Glavina Del,R.T., Nolan,M.,<br />
Tice,H., Cheng,J.F., Pitluck,S., Liolios,K., Ivanova,N., Mavromatis,K.,<br />
Mikhailova,N., Pati,A., Goodwin,L., Chen,A., Palaniappan,K., Land,M.,<br />
Hauser,L., Chang,Y.J., Jeffries,C.D., Rohde,M., Spring,S., Göker,M.,<br />
Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P.,<br />
Kyrpides,N.C., Klenk,H.P., & Lapidus,A. (<strong>2010</strong>) Permanent draft genome<br />
sequence of Dethiosulfovibrio peptidovorans type strain (SEBR<br />
4207). Standards in Genomic Sciences 3, 85-92.<br />
• Lail,K., Sikorski,J., Saunders,E., Lapidus,A., Glavina Del,R.T.,<br />
Copeland,A., Tice,H., Cheng,J.F., Lucas,S., Nolan,M., Bruce,D.,<br />
Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Ovchinnikova,G.,<br />
Pati,A., Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J.,<br />
Jeffries,C.D., Chain,P., Brettin,T., Detter,J.C., Schutze,A., Rohde,M.,<br />
Tindall,B.J., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., & Chen,F. (<strong>2010</strong>) Complete<br />
genome sequence of Spirosoma linguale type strain (1). Standards in<br />
Genomic Sciences 2, 176-185.<br />
• Liolios,K., Sikorski,J., Jando,M., Lapidus,A., Copeland,A., Glavina,T.,<br />
Del,R., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C., Woyke,T.,<br />
Goodwin,L., Pitluck,S., Ivanova,N., Mavromatis,K., Mikhailova,N.,<br />
Chertkov,O., Kuske,C., Chen,A., Palaniappan,K., Land,M., Hauser,L.,<br />
Chang,Y.J., Jeffries,C.D., Detter,J.C., Brettin,T., Rohde,M., Göker,M.,<br />
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., &<br />
Kyrpides,N.C. (<strong>2010</strong>) Complete genome sequence of Thermobispora<br />
bispora type strain (R51). Standards in Genomic Sciences 2, 318-326.<br />
• Maamary,P.G., Sanderson-Smith,M.L., Aziz,R.K., Hollands,A.,<br />
Cole,J.N., McKay,F.C., Mcarthur,J.D., Kirk,J.K., Cork,A.J., Keefe,R.J.,<br />
Kansal,R.G., Sun,H., Taylor,W.L., Chhatwal,G.S*., Ginsburg,D.,<br />
Nizet,V., Kotb,M., & Walker,M.J. (<strong>2010</strong>) Parameters governing invasive<br />
disease propensity of non-M1 serotype group A streptococci.<br />
Journal of Innate Immunology 2, 596-606.<br />
• Macke,L., Garritsen,H.S., Meyring,W., Hannig,H., Pagelow,U.,<br />
Wormann,B., Piechaczek,C., Geffers,R., Rohde,M., Lindenmaier,W.,<br />
& Dittmar,K.E.*. (<strong>2010</strong>) Evaluating maturation and genetic modifi cation<br />
of human dendritic cells in a new polyolefi n cell culture bag<br />
system. Transfusion 50, 843-855.<br />
• Marjenberg,Z.R., Ellis,I.R., Hagan,R.M., Prabhakaran,S., Hook,M.,<br />
Talay,S.R.*., Potts,J.R., Staunton,D., & Schwarz-Linek,U. (<strong>2010</strong>) Cooperative<br />
binding and activation of fi bronectin by a bacterial surface<br />
protein. Journal of Biological Chemistry 286, 1884-1894.<br />
• Mavromatis,K., Sikorski,J., Pabst,E., Teshima,H., Lapidus,A., Lucas,S.,<br />
Nolan,M., Glavina Del,R.T., Cheng,J.F., Bruce,D., Goodwin,L.,<br />
Pitluck,S., Liolios,K., Ivanova,N., Mikhailova,N., Pati,A., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Rohde,M., Spring,S., Göker,M., Wirth,R., Woyke,T., Bristow,J.,<br />
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., & Kyrpides,N.C.<br />
(<strong>2010</strong>) Complete genome sequence of Vulcanisaeta distributa type<br />
strain (IC-017). Standards in Genomic Sciences 3, <strong>11</strong>7-125.<br />
• Mavromatis,K., Abt,B., Brambilla,E., Lapidus,A., Copeland,A.,<br />
Deshpande,S., Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C.,<br />
Detter,J.C., Woyke,T., Goodwin,L., Pitluck,S., Held,B., Brettin,T.,<br />
Tapia,R., Ivanova,N., Mikhailova,N., Pati,A., Liolios,K., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Klenk,H.P., & Kyrpides,N.C. (<strong>2010</strong>) Complete genome<br />
sequence of Coraliomargarita akajimensis type strain (04OKA010-<br />
24). Standards in Genomic Sciences 2, 290-299.<br />
• Mavromatis,K., Sikorski,J., Lapidus,A., Glavina Del,R.T., Copeland,A.,<br />
Tice,H., Cheng,J.F., Lucas,S., Chen,F., Nolan,M., Bruce,D.,<br />
Goodwin,L., Pitluck,S., Ivanova,N., Ovchinnikova,G., Pati,A., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Chain,P.,<br />
Meincke,L., Sims,D., Chertkov,O., Han,C., Brettin,T., Detter,J.C.,<br />
Wahrenburg,C., Rohde,M., Pukall,R., Göker,M., Bristow,J., Eisen,J.A.,<br />
Markowitz,V., Hugenholtz,P., Klenk,H.P., & Kyrpides,N.C. (<strong>2010</strong>) Complete<br />
genome sequence of Alicyclobacillus acidocaldarius type strain<br />
(104-IA). Standards in Genomic Sciences 2, 9-18.<br />
• Mavromatis,K., Yasawong,M., Chertkov,O., Lapidus,A., Lucas,S.,<br />
Nolan,M., Del Rio,T.G., Tice,H., Cheng,J.F., Pitluck,S., Liolios,K.,<br />
Ivanova,N., Tapia,R., Han,C., Bruce,D., Goodwin,L., Pati,A., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Detter,J.C., Rohde,M., Brambilla,E., Spring,S., Göker,M., Sikorski,J.,<br />
Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P.,<br />
Klenk,H.P., & Kyrpides,N.C. (<strong>2010</strong>) Complete genome sequence of Spirochaeta<br />
smaragdinae type strain (SEBR 4228). Standards in Genomic<br />
Sciences 3, 136-144.<br />
• Moeller,R., Rohde,M., & Reitz,G. (<strong>2010</strong>) Effects of ionizing radioation<br />
on the survival of bacterial spores in artifi cial martian regolith.<br />
Icarus - International Journal of Solar System Studies 206, 783-786.<br />
• Nolan,M., Sikorski,J., Davenport,K., Lucas,S., Del Rio,T.G.,<br />
Tice,H., Cheng,J.F., Goodwin,L., Pitluck,S., Liolios,K., Ivanova,N.,<br />
Mavromatis,K., Ovchinnikova,G., Pati,A., Chen,A., Palaniappan,K.,<br />
Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D., Tapia,R., Brettin,T.,<br />
Detter,J.C., Han,C., Yasawong,M., Rohde,M., Tindall,B.J., Göker,M.,<br />
Woyke,T., Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P.,<br />
Kyrpides,N.C., Klenk,H.P., & Lapidus,A. (<strong>2010</strong>) Complete genome<br />
sequence of Ferrimonas balearica type strain (PAT). Standards in<br />
Genomic Sciences 3, 174-182.<br />
• Nolan,M., Sikorski,J., Jando,M., Lucas,S., Lapidus,A., Glavina<br />
Del,R.T., Chen,F., Tice,H., Pitluck,S., Cheng,J.F., Chertkov,O.,<br />
Sims,D., Meincke,L., Brettin,T., Han,C., Detter,J.C., Bruce,D.,<br />
Goodwin,L., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Ivanova,N., Mavromatis,K., Mikhailova,N., Chen,A., Palaniappan,K.,<br />
Chain,P., Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete genome<br />
sequence of Streptosporangium roseum type strain (NI 9100). Standard<br />
in Genomic Sciences 2, 29-37.<br />
• Pati,A., Gronow,S., Lapidus,A., Copeland,A., Glavina Del,R.T.,<br />
Nolan,M., Lucas,S., Tice,H., Cheng,J.F., Han,C., Chertkov,O.,<br />
Bruce,D., Tapia,R., Goodwin,L., Pitluck,S., Liolios,K., Ivanova,N.,<br />
Mavromatis,K., Chen,A., Palaniappan,K., Land,M., Hauser,L.,<br />
Chang,Y.J., Jeffries,C.D., Detter,J.C., Rohde,M., Göker,M., Bristow,J.,<br />
Eisen,J.A., Markowitz,V., Hugenholtz,P., Klenk,H.P., & Kyrpides,N.C.<br />
(<strong>2010</strong>) Complete genome sequence of Arcobacter nitrofi gilis type<br />
strain (CI). Standards in Genomic Sciences 2, 300-308.<br />
• Pati,A., Sikorski,J., Gronow,S., Munk,C., Lapidus,A., Copeland,A.,<br />
Glavina Del,T.T., Nolan,M., Lucas,S., Chen,F., Tice,H., Cheng,J.F.,<br />
Han,C., Detter,J.C., Bruce,D., Tapia,R., Goodwin,L., Pitluck,S.,<br />
Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Chen,A.,<br />
Palaniappan,K., Land,M., Hauser,L., Chang,Y.J., Jeffries,C.D.,<br />
Spring,S., Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., & Klenk,H.P. (<strong>2010</strong>) Complete genome<br />
sequence of Brachyspira murdochii type strain (56-150). Standards in<br />
Genomic Sciences 2, 260-269.<br />
• Pati,A., Labutti,K., Pukall,R., Nolan,M., Glavina Del,R.T., Tice,H.,<br />
Cheng,J.F., Lucas,S., Chen,F., Copeland,A., Ivanova,N., Mavromatis,K.,<br />
Mikhailova,N., Pitluck,S., Bruce,D., Goodwin,L., Land,M., Hauser,L.,<br />
Chang,Y.J., Jeffries,C.D., Chen,A., Palaniappan,K., Chain,P., Brettin,T.,<br />
Sikorski,J., Rohde,M., Göker,M., Bristow,J., Eisen,J.A., Markowitz,V.,<br />
Hugenholtz,P., Kyrpides,N.C., Klenk,H.P., & Lapidus,A. (<strong>2010</strong>) Complete<br />
genome sequence of Sphaerobacter thermophilus type strain (S<br />
6022). Standards in Genomic Sciences 2, 49-56.