Mechanistische Analysen zu Krankheits-korrelierten SNPs in ...

7 Literaturverzeichnis
altering structures. In: Biochemistry 36 (1997), S. 13552–7
[130] WÜNSCHE, W. ; SCZAKIEL, G.: The activity of siRNA in mammalian cells is related to the
kinetics of siRNA-target recognition in vitro: mechanistic implications. In: J Mol Biol 345 (2005),
Nr. 2, S. 203–9
[131] MATHEWS, D. H. ; SABINA, J. ; ZUKER, M. ; TURNER, D. H.: Expanded sequence dependence
of thermodynamic parameters improves prediction of RNA secondary structure. In: J Mol Biol
288 (1999), S. 911–940
[132] ZUKER, M.: Mfold web server for nucleic acid folding and hybridization prediction. In: Nucleic
Acids Res 31 (2003), S. 3406–3415
[133] GRIFFITHS-JONES, S. ; GROCOCK, R. J. ; VAN DONGEN, S. ; BATEMAN, A. ; ENRIGHT, A. J.:
miRBase: microRNA sequences, targets and gene nomenclature. In: Nucleic Acids Res 34
(2006), S. D140–D144
[134] BETEL, D. ; WILSON, M. ; GABOW, A. ; MARKS, D. S. ; SANDER, C.: The microRNA.org resource:
targets and expression. In: Nucleic Acids Res 36 (2008), S. D149–D153
[135] REBHAN, M. ; CHALIFA-CASPI, V. ; PRILUSKY, J. ; LANCET, D.: GeneCards: integrating information
about genes, proteins and diseases. In: Trends Genet 13 (1997), S. 163
[136] WU, C. ; OROZCO, C. ; BOYER, J. ; LEGLISE, M. ; GOODALE, J. ; BATALOV, S. ; HODGE, C. L. ;
HAASE, J. ; JANES, J. ; HUSS, Jon W. 3rd ; SU, A. I.: BioGPS: an extensible and customizable
portal for querying and organizing gene annotation resources. In: Genome Biol 10 (2009), S.
R130
[137] SHERRY, S. T. ; WARD, M. H. ; KHOLODOV, M. ; BAKER, J. ; PHAN, L. ; SMIGIELSKI, E. M.
; SIROTKIN, K.: dbSNP: the NCBI database of genetic variation. In: Nucleic Acids Res 29
(2001), S. 308–311
[138] MOONEY, S. D. ; ALTMAN, R. B.: MutDB: annotating human variation with functionally relevant
data. In: Bioinformatics 19 (2003), S. 1858–1860
[139] BAO, L. ; ZHOU, M. ; WU, L. ; LU, L. ; GOLDOWITZ, D. ; WILLIAMS, R. W. ; CUI, Y.: PolymiRTS
Database: linking polymorphisms in microRNA target sites with complex traits. In: Nucleic Acids
Res 35 (2007), S. D51–D54
[140] ZIEBARTH, J. D. ; BHATTACHARYA, A. ; CHEN, A. ; CUI, Y.: PolymiRTS Database 2.0: linking
polymorphisms in microRNA target sites with human diseases and complex traits. In: Nucleic
Acids Res 40 (2012), S. D216–D221
[141] GONG, J. ; TONG, Y. ; ZHANG, H.-M. ; WANG, K. ; HU, T. ; SHAN, G. ; SUN, J. ; GUO, A.-Y.:
Genome-wide identification of SNPs in microRNA genes and the SNP effects on microRNA
target binding and biogenesis. In: Hum Mutat 33 (2012), S. 254–263
[142] LARKIN, M. A. ; BLACKSHIELDS, G. ; BROWN, N. P. ; CHENNA, R. ; MCGETTIGAN, P. A. ; MCWIL-
LIAM, H. ; VALENTIN, F. ; WALLACE, I. M. ; WILM, A. ; LOPEZ, R. ; THOMPSON, J. D. ; GIBSON,
T. J. ; HIGGINS, D. G.: Clustal W and Clustal X version 2.0. In: Bioinformatics 23 (2007), S.
2947–2948
[143] REHMSMEIER, M. ; STEFFEN, P. ; HOCHSMANN, M. ; GIEGERICH, R.: Fast and effective prediction
of microRNA/target duplexes. In: RNA 10 (2004), S. 1507–1517
[144] STOTHARD, P.: The sequence manipulation suite: JavaScript programs for analyzing and formatting
protein and DNA sequences. In: Biotechniques 28 (2000), S. 1102–1104
[145] MARTIN, M. M. ; LEE, E. J. ; BUCKENBERGER, J. A. ; SCHMITTGEN, T. D. ; ELTON, T. S.:
MicroRNA-155 regulates human angiotensin II type 1 receptor expression in fibroblasts. In:
J Biol Chem 281 (2006), S. 18277–84
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