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Handbook of Solvents - George Wypych - ChemTech - Ventech!

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426 Jacopo Tomasi, Benedetta Mennucci, Chiara Cappelli<br />

low on the variational approach, then adding the basic elements <strong>of</strong> the perturbation theory<br />

approach.<br />

8.4.1 DECOMPOSITION OF THE INTERACTION ENERGY OF A DIMER:<br />

VARIATIONAL APPROACH<br />

Coming back to Figure 8.1, its shape exhibiting a minimum makes it manifest that there are<br />

several types <strong>of</strong> interactions at work, with different signs and with different distance decays<br />

(at infinity all interactions go to zero). This subject has been amply studied and the main<br />

conclusions (there are details differing in the various schemes <strong>of</strong> interaction energy decomposition)<br />

are so widely known and intuitive that we feel authorized to introduce them here<br />

before giving a formal definition (that will be considered later). In Table 8.1 we report the<br />

names <strong>of</strong> these components <strong>of</strong> the interaction energy.<br />

Table 8.1. The main components <strong>of</strong> the bimolecular interactions ΔE AB(R)<br />

Component name Acronym Physical Meaning<br />

Electrostatic ES Coulomb interactions between rigid charge distributions<br />

Induction IND Mutual electrostatic deformation <strong>of</strong> the two charge distributions<br />

Exchange EX Quantum effect due to the Pauli exclusion principle<br />

Dispersion DIS<br />

Interactions among fluctuations in the charge distributions <strong>of</strong><br />

the two partners<br />

Charge transfer CT Transfer <strong>of</strong> electrons between partners<br />

All components <strong>of</strong> ΔEAB(R) are present in all points <strong>of</strong> the RAB 6-dimensional space<br />

we have introduced. It is convenient to examine them separately. We shall make references<br />

to a single decomposition scheme 2 that we consider more convenient. Reference to other<br />

schemes will be done when necessary. Another view <strong>of</strong> methods may be found in Tomasi et<br />

al. 3<br />

The electrostatic term<br />

The ES term may be positive or negative: the shape <strong>of</strong> the ES(R) function strongly depends<br />

on the electric characteristics <strong>of</strong> the partners. If both molecules are reduced to dipoles, we<br />

have the two extreme situations (see Figure 8.2) which give rise to repulsive (i.e., positive)<br />

and attractive (i.e., negative) electrostatic contributions to ΔEAB, respectively. With different<br />

orientations <strong>of</strong> the two dipoles there will be different values <strong>of</strong> ES that in this simple case<br />

can be obtained with an analytical expression:<br />

( )<br />

ES R, θ μ μ cos θ/<br />

R<br />

=−2 1 2<br />

3<br />

[8.12]<br />

In more complex molecules, the ES(R) function has a complex shape that <strong>of</strong>ten determines<br />

the salient features <strong>of</strong> the whole ΔE AB(R) function. This is the reason why in the studies<br />

<strong>of</strong> molecular recognition and molecular docking, great attention is paid to a proper<br />

representation <strong>of</strong> ES(R).<br />

In the various methods for the decomposition <strong>of</strong> ΔE AB(R) there are no differences in<br />

the definition <strong>of</strong> ES. This quantity can be easily computed with ab initio methods, and the<br />

following recipe is the speediest and more used way <strong>of</strong> doing it.

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