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Handbook of Solvents - George Wypych - ChemTech - Ventech!

Handbook of Solvents - George Wypych - ChemTech - Ventech!

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2.1 Solvent effects on chemical systems 25<br />

Figure 2.1.10. Intramolecular and intermolecular proton transfer in glycine, leading from the neutral form to the<br />

zwitterionic one.<br />

Table 2.1.2. Relative energies (in Kcal/mol) for the complexes formed between a<br />

molecule <strong>of</strong> water with the neutral glycine (NE·H 2O), the zwitterion (ZW·H 2O), and the<br />

state <strong>of</strong> transition (TS·H 2O), as well as for the neutral glycine system and independent<br />

molecule <strong>of</strong> water (NE+H 2O), obtained with a base HF/6-31+G**<br />

NE·H2O TS·H2O ZW·H2O NE+H2O<br />

0 29.04 16.40 4.32<br />

the supermolecule calculation, the intramolecular mechanism will still continue as the preferred<br />

in the autoionization <strong>of</strong> the glycine. The model <strong>of</strong> supermolecule has been useful to<br />

us, along with the competition <strong>of</strong> other models, 54,55 to shed light on the mechanism by which<br />

an aminoacid is autoionized in aqueous solution.<br />

If the calculations are done again but this time including the presence <strong>of</strong> the solvent by<br />

means <strong>of</strong> a continuum model (implemented by means <strong>of</strong> a dielectric constant = 78.4; for the<br />

water), the situation becomes different. 55,58-60 Now it is the conformation closest to the zwitterionic<br />

(II) which is the most stable, by some 2.7 Kcal/mol. This could be explained on the<br />

basis <strong>of</strong> the greater dipolar moment <strong>of</strong> the structure (6.3 Debyes for the conformation II<br />

compared to 1.3 <strong>of</strong> the conformation I).<br />

The next step was to reproduce the formation <strong>of</strong> the zwitterion starting with the most<br />

stable initial structure in the midst <strong>of</strong> the solvent (II). Using the continuum model, we observe<br />

how the structure II evolves towards a state <strong>of</strong> transition which, once overcome, leads

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