Molecular Biology of the Cell by Bruce Alberts, Alexander Johnson, Julian Lewis, David Morgan, Martin Raff, Keith Roberts, Peter Walter by by Bruce Alberts, Alexander Johnson, Julian Lewis, David Morg

1296 Chapter 23: Pathogens and Infection
References
General
Cossart P, Boquet P, Normark S & Rappuoli R (eds) (2005) Cellular
Microbiology, 2nd ed. Washington, DC: ASM Press.
Engleberg NC, DiRita V & Dermody T (2012) Schaechter’s Mechanisms
of Microbial Disease, 5th ed. Philadelphia, PA: Lippincott, Williams
& Wilkins.Norkin LA (2010) Virology: Molecular Biology and
Pathogenesis. Washington, DC: ASM Press.
Wilson BA, Salyers AA, Whitt DD & Winkler ME (2011) Bacterial
Pathogenesis: A Molecular Approach, 3rd ed. Washington, DC:
ASM Press.
Introduction to Pathogens and the Human Microbiota
Aly AS, Vaughan AM & Kappe SH (2009) Malaria parasite development
in the mosquito and infection of the mammalian host. Annu. Rev.
Microbiol. 63, 195–221.
Baltimore D (1971) Expression of animal virus genomes. Bacteriol. Rev.
35, 235–241.
Clemente JC, Ursell LK, Parfrey LW & Knight R (2012) The impact of
the gut microbiota on human health: an integrative view. Cell
148, 1258–1270.
Crick FH & Watson JD (1956) Structure of small viruses. Nature
177, 473–475.
Fauci A & Morens DM (2012) The perpetual challenge of infectious
diseases. N. Engl. J. Med. 366, 454–461.
Frost LS, Leplae R, Summers AO & Toussaint A (2005) Mobile genetic
elements: the agents of open source evolution. Nat. Rev. Microbiol.
3, 722 –732.
Galán JE & Wolf-Watz H (2006) Protein delivery into eukaryotic cells by
type III secretion machines. Nature 444, 567–573.
Hacker J & Kaper JB (2000) Pathogenicity islands and the evolution of
microbes. Annu. Rev. Microbiol. 54, 641–679.
Nelson EJ, Harris JB, Morris JG Jr et al. (2009) Cholera transmission:
the host, pathogen and bacteriophage dynamic. Nat. Rev.
Microbiol. 7, 693–702.
Pflughoeft KJ & Versalovic J (2012) Human microbiome in health and
disease. Annu. Rev. Pathol. 7, 99–122.
Polk DB & Peek RM Jr (2010) Helicobacter pylori: gastric cancer and
beyond. Nat. Rev. Cancer 10, 403–414.
Poulin R & Morand S (2000) The diversity of parasites. Q. Rev. Biol.
75, 277–293.
Rappleye CA & Goldman WE (2006) Defining virulence genes in the
dimorphic fungi. Annu. Rev. Microbiol. 60, 281–303.
Thomas CM & Nielsen KM (2005) Mechanisms of, and barriers to,
horizontal gene transfer between bacteria. Nat. Rev. Microbiol.
3, 711–721.
Votteler J & Sundquist WI (2013) Virus budding and the ESCRT
pathway. Cell Host Microbe 14, 232–241.
Young JAT & Collier RJ (2007) Anthrax toxin: receptor binding,
internalization, pore formation, and translocation. Annu. Rev.
Biochem. 76, 243–265.
Cell Biology of Infection
Alix E, Mukherjee S & Roy CR (2011) Subversion of membrane
transport pathways by vacuolar pathogens. J. Cell Biol. 195,
943–952.
Beiting DP & Roos DS (2011) A systems biological view of intracellular
pathogens. Immunol. Rev. 240, 117–128.
Brandenburg B & Zhuang X (2007) Virus trafficking – learning from
single-virus tracking. Nat. Rev. Microbiol. 5, 197–208.
Cossart P & Sansonetti PJ (2004) Bacterial invasion: the paradigms of
enteroinvasive pathogens. Science 304, 242–248.
Daugherty MD & Malik HS (2012) Rules of engagement: molecular
insights from host-virus arms races. Annu. Rev. Genet. 46,
677–700.
Davies J & Davies D (2010) Origins and evolution of antibiotic
resistance. Microbiol. Mol. Biol. Rev. 74, 417–433.
Dimitrov DS (2004) Virus entry: molecular mechanisms and biomedical
applications. Nat. Rev. Microbiol. 2, 109–122.
Duffy S, Shackelton LA & Holmes EC (2008) Rates of evolutionary
change in viruses: patterns and determinants. Nat. Rev. Genet.
9, 267–276.
Forsberg KJ, Reyes A, Wang B et al. (2012) The shared antibiotic
resistome of soil bacteria and human pathogens. Science
337, 1107–1111.
Ghedin E, Sengamalay NA, Shumway M et al. (2005) Large-scale
sequencing of human influenza reveals the dynamic nature of viral
genome evolution. Nature 437, 1162–1166.
Goldberg DE, Siliciano RF & Jacobs WR Jr (2012) Outwitting
evolution: fighting drug-resistant TB, malaria, and HIV. Cell
148, 1271–1283.
Haglund CM & Welch MD (2011) Pathogens and polymers: microbehost
interactions illuminate the cytoskeleton. J. Cell Biol. 195,
7–17.
Ham H, Sreelatha A & Orth K (2011) Manipulation of host membranes
by bacterial effectors. Nat. Rev. Microbiol. 9, 635–646.
Hayward RD, Leong JM, Koronakis V & Campellone KG (2006)
Exploiting pathogenic Escherichia coli to model transmembrane
receptor signalling. Nat. Rev. Microbiol. 4, 358–370.
Kenny B, DeVinney R, Stein M et al. (1997) Enteropathogenic E. coli
(EPEC) transfers its receptor for intimate adherence into
mammalian cells. Cell 91, 511–520.
Lusso P (2006) HIV and the chemokine system: 10 years later. EMBO
J. 25, 447–456.
Medina RA & García-Sastre A (2011) Influenza A viruses: new research
developments. Nat. Rev. Microbiol. 9, 590–603.
Mengaud J, Ohayon H, Gounon P et al. (1996) E-cadherin is the
receptor for internalin, a surface protein required for entry of
L. monocytogenes into epithelial cells. Cell 84, 923–932.
Mercer J, Schelhaas M & Helenius A (2010) Virus entry by endocytosis.
Annu. Rev. Biochem. 79, 803–833.
Miller S & Krijnse-Locker J (2008) Modification of intracellular membrane
structures for virus replication. Nat. Rev. Microbiol. 6, 363–374.
Mullins JI & Jensen MA (2006) Evolutionary dynamics of HIV-1 and the
control of AIDS. Curr. Top. Microbiol. Immunol. 299, 171–192.
Parrish CR & Kawaoka Y (2005) The origins of new pandemic viruses:
the acquisition of new host ranges by canine parvovirus and
influenza A viruses. Annu. Rev. Microbiol. 59, 553–586.
Pizarro-Cerdá J & Cossart P (2006) Bacterial adhesion and entry into
host cells. Cell 124, 715–727.
Ray K, Marteyn B, Sansonetti PJ & Tang CM (2009) Life on the inside:
the intracellular lifestyle of cytosolic bacteria. Nat. Rev. Microbiol.
7, 333–340.
Sibley LD (2011) Invasion and intracellular survival by protozoan
parasites. Immunol. Rev. 240, 72–91.
Tilney LG & Portnoy DA (1989) Actin filaments and the growth,
movement, and spread of the intracellular bacterial parasite,
Listeria monocytogenes. J. Cell Biol. 109, 1597–1608.
Vink C, Rudenko G & Seifert HS (2012) Microbial antigenic variation
mediated by homologous DNA recombination. FEMS Microbiol.
Rev. 36, 917–948.
Walsh D & Mohr I (2011) Viral subversion of the host protein synthesis
machinery. Nat. Rev. Microbiol. 9, 860–875.
Welch MD & Way M (2013) Arp2/3-mediated actin-based motility: a tail
of pathogen abuse. Cell Host Microbe 14, 242–255.